Information for 12-CAGGCGCAGTCAC (Motif 15)

G T A C T C G A A C T G A C T G G T A C T C A G A G T C T C G A A T C G G A C T A G T C C G T A A G T C
Reverse Opposite:
A C T G C G A T A C T G C T G A A T G C A C G T A C T G A G T C A C T G G T A C A G T C A C G T A C T G
p-value:1e-11
log p-value:-2.639e+01
Information Content per bp:1.788
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.8 +/- 21.3bp
Average Position of motif in Background40.0 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAGGCGCAGTCAC
--TGCGCAGGCGC
 G T A C T C G A A C T G A C T G G T A C T C A G A G T C T C G A A T C G G A C T A G T C C G T A A G T C
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCGCAGTCAC------
YCAGGCWCAGTACCAGGCTC
 A C G T G T A C T C G A A C T G A C T G G T A C T C A G A G T C T C G A A T C G G A C T A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGGCGCAGTCAC
--GGCGCGCT---
 G T A C T C G A A C T G A C T G G T A C T C A G A G T C T C G A A T C G G A C T A G T C C G T A A G T C
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGGCGCAGTCAC
GCGCATGCGCAG----
 A C G T A C G T A C G T G T A C T C G A A C T G A C T G G T A C T C A G A G T C T C G A A T C G G A C T A G T C C G T A A G T C
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGGCGCAGTCAC
CCAGGAACAG----
 A C G T G T A C T C G A A C T G A C T G G T A C T C A G A G T C T C G A A T C G G A C T A G T C C G T A A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CAGGCGCAGTCAC--
-------AGTCACGC
 G T A C T C G A A C T G A C T G G T A C T C A G A G T C T C G A A T C G G A C T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGGCGCAGTCAC
ATCCACAGGTGCGAAAA-
 A C G T A C G T A C G T A C G T A C G T G T A C T C G A A C T G A C T G G T A C T C A G A G T C T C G A A T C G G A C T A G T C C G T A A G T C
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAGGCGCAGTCAC
AGCAACAGCCGCACC---
 A C G T A C G T A C G T A C G T A C G T G T A C T C G A A C T G A C T G G T A C T C A G A G T C T C G A A T C G G A C T A G T C C G T A A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGGCGCAGTCAC---
AAGCACCTGTCAATAT
 G T A C T C G A A C T G A C T G G T A C T C A G A G T C T C G A A T C G G A C T A G T C C G T A A G T C A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGGCGCAGTCAC----
-AGCGGCACACACGCAA
 G T A C T C G A A C T G A C T G G T A C T C A G A G T C T C G A A T C G G A C T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A