Information for 8-GTCTTGGCCC (Motif 13)

A C T G A G C T A T G C G C A T G C A T C A T G A T C G T A G C A G T C A G T C
Reverse Opposite:
T C A G C T A G A T C G A T G C G T A C C G T A C G T A T A C G T C G A T G A C
p-value:1e-9
log p-value:-2.288e+01
Information Content per bp:1.560
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.47%
Number of Background Sequences with motif372.2
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets51.5 +/- 28.5bp
Average Position of motif in Background48.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTCTTGGCCC------
TGTCGTGACCCCTTAAT
 A C G T A C T G A G C T A T G C G C A T G C A T C A T G A T C G T A G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTCTTGGCCC
----TGACCT
 A C T G A G C T A T G C G C A T G C A T C A T G A T C G T A G C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCTTGGCCC
TGACCTTGACCT
 A C G T A C G T A C T G A G C T A T G C G C A T G C A T C A T G A T C G T A G C A G T C A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTCTTGGCCC------
NNCNTGACCCCGCTCT
 A C T G A G C T A T G C G C A T G C A T C A T G A T C G T A G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCTTGGCCC------
NNNNTGACCCGGCGCG
 A C T G A G C T A T G C G C A T G C A T C A T G A T C G T A G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GTCTTGGCCC--
----TGACCYCT
 A C T G A G C T A T G C G C A T G C A T C A T G A T C G T A G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTGGCCC------
NNANTTGACCCCTNNNN
 A C G T A C T G A G C T A T G C G C A T G C A T C A T G A T C G T A G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTCTTGGCCC
TGACCTTGACCT
 A C G T A C G T A C T G A G C T A T G C G C A T G C A T C A T G A T C G T A G C A G T C A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTGGCCC------
NNNNTTGACCCCTNNNN
 A C G T A C T G A G C T A T G C G C A T G C A T C A T G A T C G T A G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GTCTTGGCCC--
----TGACCTYA
 A C T G A G C T A T G C G C A T G C A T C A T G A T C G T A G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A