Information for 5-GAGGGGCAAAGGG (Motif 9)

A C T G C G T A A C T G A C T G A C T G A C T G A T G C G T C A G T C A C T G A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G C T A C G T A C G T A T C G A G T C A G T C G T A C A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.563e+01
Information Content per bp:1.903
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.6 +/- 26.6bp
Average Position of motif in Background48.1 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAGGGGCAAAGGG--
GTAGGGCAAAGGTCA
 A C T G C G T A A C T G A C T G A C T G A C T G A T G C G T C A G T C A C T G A A C T G A C T G A C T G A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GAGGGGCAAAGGG--
-TGGGGCAAAGGTCA
 A C T G C G T A A C T G A C T G A C T G A C T G A T G C G T C A G T C A C T G A A C T G A C T G A C T G A C G T A C G T
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGCAAAGGG
GGAGGGGGAA----
 A C G T A C T G C G T A A C T G A C T G A C T G A C T G A T G C G T C A G T C A C T G A A C T G A C T G A C T G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAGGGGCAAAGGG--
-TAGGGCAAAGGTCA
 A C T G C G T A A C T G A C T G A C T G A C T G A T G C G T C A G T C A C T G A A C T G A C T G A C T G A C G T A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAGGGGCAAAGGG
TGCGGAGTGGGACTGG-
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A C T G A T G C G T C A G T C A C T G A A C T G A C T G A C T G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGGGGCAAAGGG-
GGGGCCCAAGGGGG
 A C T G C G T A A C T G A C T G A C T G A C T G A T G C G T C A G T C A C T G A A C T G A C T G A C T G A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGGGGCAAAGGG--
AGGGGTCAGAGGTCA
 A C T G C G T A A C T G A C T G A C T G A C T G A T G C G T C A G T C A C T G A A C T G A C T G A C T G A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGGGGCAAAGGG
GTGGGGGAGGGG-
 A C T G C G T A A C T G A C T G A C T G A C T G A T G C G T C A G T C A C T G A A C T G A C T G A C T G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGGGCAAAGGG--
-GGGGTCAAAGGTCA
 A C T G C G T A A C T G A C T G A C T G A C T G A T G C G T C A G T C A C T G A A C T G A C T G A C T G A C G T A C G T
A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGGGCAAAGGG--
-GAGGTCAAAGGTCA
 A C T G C G T A A C T G A C T G A C T G A C T G A T G C G T C A G T C A C T G A A C T G A C T G A C T G A C G T A C G T
A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A