Information for 3-CTCAGCTGGCTGGCCG (Motif 6)

A G T C G A C T A G T C C G T A A C T G A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C T G A G T C G T A C A C T G
Reverse Opposite:
A G T C C A T G A C T G A G T C G T A C C G T A A C T G T A G C A G T C C G T A A C T G A G T C C G A T A C T G C G T A A C T G
p-value:1e-13
log p-value:-3.084e+01
Information Content per bp:1.863
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.8 +/- 9.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCAGCTGGCTGGCCG
NAHCAGCTGD-------
 A C G T A G T C G A C T A G T C C G T A A C T G A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C T G A G T C G T A C A C T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCTGGCTGGCCG
DCHCAGCAGGRGGCC--
 A C G T A G T C G A C T A G T C C G T A A C T G A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C T G A G T C G T A C A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCTGGCTGGCCG
NNGCAGCTGTC------
 A C G T A G T C G A C T A G T C C G T A A C T G A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C T G A G T C G T A C A C T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCAGCTGGCTGGCCG
NAACAGCTGG-------
 A C G T A G T C G A C T A G T C C G T A A C T G A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C T G A G T C G T A C A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTCAGCTGGCTGGCCG
--CAGCTGNT------
 A G T C G A C T A G T C C G T A A C T G A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C T G A G T C G T A C A C T G
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCAGCTGGCTGGCCG
NNVVCAGCTGBN------
 A C G T A C G T A G T C G A C T A G T C C G T A A C T G A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C T G A G T C G T A C A C T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCAGCTGGCTGGCCG
-GCAGCTGTNN-----
 A G T C G A C T A G T C C G T A A C T G A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C T G A G T C G T A C A C T G
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCAGCTGGCTGGCCG
--CAGCTGTT------
 A G T C G A C T A G T C C G T A A C T G A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C T G A G T C G T A C A C T G
A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCTGGCTGGCCG
DCTCAGCAGG-------
 A C G T A G T C G A C T A G T C C G T A A C T G A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C T G A G T C G T A C A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCAGCTGGCTGGCCG
CACAGCAGGGGG----
 A G T C G A C T A G T C C G T A A C T G A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C T G A G T C G T A C A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T