Information for 2-CAGRGGCTCAGGGTCA (Motif 3)

A T G C C G T A A C T G C T A G C T A G C T A G A G T C G A C T A T G C G T C A A C T G T C A G A T C G A G C T A T G C C G T A
Reverse Opposite:
C G A T A T C G C T G A A T G C A G T C G T A C A C G T T A C G C T G A T A C G A G T C G A T C G A T C A G T C A C G T A T C G
p-value:1e-16
log p-value:-3.743e+01
Information Content per bp:1.735
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 17.3bp
Average Position of motif in Background22.6 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGRGGCTCAGGGTCA----
----CGCGCCGGGTCACGTA
 A T G C C G T A A C T G C T A G C T A G C T A G A G T C G A C T A T G C G T C A A C T G T C A G A T C G A G C T A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CAGRGGCTCAGGGTCA
-----GCTCGGSCTC-
 A T G C C G T A A C T G C T A G C T A G C T A G A G T C G A C T A T G C G T C A A C T G T C A G A T C G A G C T A T G C C G T A
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CAGRGGCTCAGGGTCA--
-------TCAAGGTCATA
 A T G C C G T A A C T G C T A G C T A G C T A G A G T C G A C T A T G C G T C A A C T G T C A G A T C G A G C T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAGRGGCTCAGGGTCA
AAGGCCAGATGGTCCGG----
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G C T A G C T A G C T A G A G T C G A C T A T G C G T C A A C T G T C A G A T C G A G C T A T G C C G T A
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CAGRGGCTCAGGGTCA--
---AAGTTCAAGGTCAGC
 A T G C C G T A A C T G C T A G C T A G C T A G A G T C G A C T A T G C G T C A A C T G T C A G A T C G A G C T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CAGRGGCTCAGGGTCA
CACAGN------------
 A C G T A C G T A T G C C G T A A C T G C T A G C T A G C T A G A G T C G A C T A T G C G T C A A C T G T C A G A T C G A G C T A T G C C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CAGRGGCTCAGGGTCA
------BTCAAGGTCA
 A T G C C G T A A C T G C T A G C T A G C T A G A G T C G A C T A T G C G T C A A C T G T C A G A T C G A G C T A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CAGRGGCTCAGGGTCA-
------TTCAAGGTCAT
 A T G C C G T A A C T G C T A G C T A G C T A G A G T C G A C T A T G C G T C A A C T G T C A G A T C G A G C T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CAGRGGCTCAGGGTCA-----
----TATTCAAGGTCATGCGA
 A T G C C G T A A C T G C T A G C T A G C T A G A G T C G A C T A T G C G T C A A C T G T C A G A T C G A G C T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CAGRGGCTCAGGGTCA
----AGGTCAAGGTCA
 A T G C C G T A A C T G C T A G C T A G C T A G A G T C G A C T A T G C G T C A A C T G T C A G A T C G A G C T A T G C C G T A
A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A