Information for 8-CAGAACACCCAGCAAC (Motif 27)

A G T C C G T A A C T G T C G A C G T A A G T C C G T A A T G C A T G C G T A C C G T A A C T G A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A G T C A C G T A C T G A T C G A T C G A C G T A C T G C G A T A C G T A G T C A C G T A C T G
p-value:1e-6
log p-value:-1.392e+01
Information Content per bp:1.887
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.8 +/- 14.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAGAACACCCAGCAAC---
----CCGCATAGCAACGGA
 A G T C C G T A A C T G T C G A C G T A A G T C C G T A A T G C A T G C G T A C C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CAGAACACCCAGCAAC--
------SCCTAGCAACAG
 A G T C C G T A A C T G T C G A C G T A A G T C C G T A A T G C A T G C G T A C C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGAACACCCAGCAAC-------
TGTGACCCTTAGCAACCGATTAA
 A G T C C G T A A C T G T C G A C G T A A G T C C G T A A T G C A T G C G T A C C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGAACACCCAGCAAC---
----TACCATAGCAACGGT
 A G T C C G T A A C T G T C G A C G T A A G T C C G T A A T G C A T G C G T A C C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGAACACCCAGCAAC-
--TGTTKCCTAGCAACM
 A G T C C G T A A C T G T C G A C G T A A G T C C G T A A T G C A T G C G T A C C G T A A C T G A G T C C G T A C G T A A G T C A C G T
A C G T A C G T C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGAACACCCAGCAAC
-GGACCACCCACG---
 A G T C C G T A A C T G T C G A C G T A A G T C C G T A A T G C A T G C G T A C C G T A A C T G A G T C C G T A C G T A A G T C
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAGAACACCCAGCAAC
--GATGACTCAGCA--
 A G T C C G T A A C T G T C G A C G T A A G T C C G T A A T G C A T G C G T A C C G T A A C T G A G T C C G T A C G T A A G T C
A C G T A C G T T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CAGAACACCCAGCAAC-
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A C G T A G T C C G T A A C T G T C G A C G T A A G T C C G T A A T G C A T G C G T A C C G T A A C T G A G T C C G T A C G T A A G T C A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

MAFF/MA0495.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CAGAACACCCAGCAAC----
--GCTGAGTCAGCAATTTTT
 A G T C C G T A A C T G T C G A C G T A A G T C C G T A A T G C A T G C G T A C C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CAGAACACCCAGCAAC
---ATGACTCAGCAD-
 A G T C C G T A A C T G T C G A C G T A A G T C C G T A A T G C A T G C G T A C C G T A A C T G A G T C C G T A C G T A A G T C
A C G T A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T