Information for 12-CGAAGCAMAG (Motif 26)

G T A C A C T G C G T A G T C A A C T G A G T C G T C A G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A C T G G T A C A C G T A C G T A G T C A C T G
p-value:1e-6
log p-value:-1.405e+01
Information Content per bp:1.884
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif40.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets45.5 +/- 31.7bp
Average Position of motif in Background50.5 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGAAGCAMAG
NGAAGC----
 G T A C A C T G C G T A G T C A A C T G A G T C G T C A G T C A C G T A A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGAAGCAMAG------
CGAAGCACACAAAATA
 G T A C A C T G C G T A G T C A A C T G A G T C G T C A G T C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGAAGCAMAG-
-AAAACAAAGG
 G T A C A C T G C G T A G T C A A C T G A G T C G T C A G T C A C G T A A C T G A C G T
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGAAGCAMAG-
-AAACCACAGC
 G T A C A C T G C G T A G T C A A C T G A G T C G T C A G T C A C G T A A C T G A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CGAAGCAMAG-
-----CACAGN
 G T A C A C T G C G T A G T C A A C T G A G T C G T C A G T C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGAAGCAMAG
CCAGGAACAG
 G T A C A C T G C G T A G T C A A C T G A G T C G T C A G T C A C G T A A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGAAGCAMAG--
-AAATCACAGCA
 G T A C A C T G C G T A G T C A A C T G A G T C G T C A G T C A C G T A A C T G A C G T A C G T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGAAGCAMAG
CGGAGC----
 G T A C A C T G C G T A G T C A A C T G A G T C G T C A G T C A C G T A A C T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGAAGCAMAG-
-GGAACAAAGR
 G T A C A C T G C G T A G T C A A C T G A G T C G T C A G T C A C G T A A C T G A C G T
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGAAGCAMAG
NAAACCACAG
 G T A C A C T G C G T A G T C A A C T G A G T C G T C A G T C A C G T A A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G