Information for 11-TACAAATCCC (Motif 25)

A G C T G C T A A G T C C T G A C T G A G T C A A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G G T C A C A G T A G C T A G C T A C T G C G A T C T G A
p-value:1e-7
log p-value:-1.643e+01
Information Content per bp:1.856
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif104.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets62.2 +/- 24.7bp
Average Position of motif in Background55.2 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--TACAAATCCC
ACTACAATTCCC
 A C G T A C G T A G C T G C T A A G T C C T G A C T G A G T C A A C G T A G T C A G T C A G T C
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TACAAATCCC-------
RACTACAACTCCCAGVAKGC
 A C G T A C G T A C G T A G C T G C T A A G T C C T G A C T G A G T C A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TACAAATCCC--
--CAAATCACTG
 A G C T G C T A A G T C C T G A C T G A G T C A A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TACAAATCCC-------
AACTACAATTCCCAGAATGC
 A C G T A C G T A C G T A G C T G C T A A G T C C T G A C T G A G T C A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TACAAATCCC-
---TAATCCCN
 A G C T G C T A A G T C C T G A C T G A G T C A A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TACAAATCCC
-CTTAATCCC
 A G C T G C T A A G T C C T G A C T G A G T C A A C G T A G T C A G T C A G T C
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TACAAATCCC----
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T A G C T G C T A A G T C C T G A C T G A G T C A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TACAAATCCC-----
NTTGTTAATCCCTCTNN
 A C G T A C G T A G C T G C T A A G T C C T G A C T G A G T C A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0129.1_Otx1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TACAAATCCC----
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A G C T G C T A A G T C C T G A C T G A G T C A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TACAAATCCC-
-NYTAATCCYB
 A G C T G C T A A G T C C T G A C T G A G T C A A C G T A G T C A G T C A G T C A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T