Information for 10-GGGGTGAAAG (Motif 24)

A C T G C T A G C T A G T C A G C G A T A T C G C G T A T C G A C T G A C T A G
Reverse Opposite:
G A T C A G C T A G C T A C G T A T G C G C T A A G T C G A T C A G T C G T A C
p-value:1e-7
log p-value:-1.705e+01
Information Content per bp:1.840
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif380.6
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets50.5 +/- 26.7bp
Average Position of motif in Background49.2 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTGAAAG--
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T A G T C A G C G A T A T C G C G T A T C G A C T G A C T A G A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGGTGAAAG
AGGTGTGAAA-
 A C G T A C T G C T A G C T A G T C A G C G A T A T C G C G T A T C G A C T G A C T A G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGGGTGAAAG
GTGGCGTGACNG
 A C G T A C G T A C T G C T A G C T A G T C A G C G A T A T C G C G T A T C G A C T G A C T A G
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGGGTGAAAG
AAGGTGTGAAA-
 A C G T A C G T A C T G C T A G C T A G T C A G C G A T A T C G C G T A T C G A C T G A C T A G
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGGGTGAAAG-
AAGGTGTGAAAAT
 A C G T A C G T A C T G C T A G C T A G T C A G C G A T A T C G C G T A T C G A C T G A C T A G A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGGGTGAAAG
GTGGGGTGAT--
 A C G T A C G T A C T G C T A G C T A G T C A G C G A T A T C G C G T A T C G A C T G A C T A G
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGGGTGAAAG
ATGGGGTGAT--
 A C G T A C G T A C T G C T A G C T A G T C A G C G A T A T C G C G T A T C G A C T G A C T A G
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGGTGAAAG----
GGGGTCAAAGGTCA
 A C T G C T A G C T A G T C A G C G A T A T C G C G T A T C G A C T G A C T A G A C G T A C G T A C G T A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGGGTGAAAG
ATGGGGTGAT--
 A C G T A C G T A C T G C T A G C T A G T C A G C G A T A T C G C G T A T C G A C T G A C T A G
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGGTGAAAG----
GGGGTCAAAGGTCA
 A C T G C T A G C T A G T C A G C G A T A T C G C G T A T C G A C T G A C T A G A C G T A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A