Information for 8-CCCTGCAGCG (Motif 21)

A G T C G T A C A G T C A C G T A C T G G T A C T C G A T C A G G T A C A T C G
Reverse Opposite:
T A G C C A T G A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.831
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif608.2
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets46.2 +/- 24.3bp
Average Position of motif in Background48.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCAGCG-
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G G T A C T C G A T C A G G T A C A T C G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCAGCG
CCCCCTGCTGTG
 A C G T A C G T A G T C G T A C A G T C A C G T A C T G G T A C T C G A T C A G G T A C A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CCCTGCAGCG--
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G G T A C T C G A T C A G G T A C A T C G A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCAGCG---
TCNCCTGCTGNGNNN
 A C G T A C G T A G T C G T A C A G T C A C G T A C T G G T A C T C G A T C A G G T A C A T C G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCAGCG-
GACCCCCCGCTGCGC
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G G T A C T C G A T C A G G T A C A T C G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCAGCG---
TNTCCTGCTGTGNNG
 A C G T A C G T A G T C G T A C A G T C A C G T A C T G G T A C T C G A T C A G G T A C A T C G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCAGCG-
GACCCCCCGCTGTGC
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G G T A C T C G A T C A G G T A C A T C G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCCTGCAGCG-
-CCTGCTGAGH
 A G T C G T A C A G T C A C G T A C T G G T A C T C G A T C A G G T A C A T C G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCAGCG
GACCCCCCGCTGTG
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G G T A C T C G A T C A G G T A C A T C G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCAGCG---
NNTCCTGCTGTGNNN
 A C G T A C G T A G T C G T A C A G T C A C G T A C T G G T A C T C G A T C A G G T A C A T C G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C