Information for 5-TTGTCATGCTGGCCAC (Motif 13)

A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A T G C A C G T A C T G A T C G A G T C A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G T C A G A T G C A G T C C G T A A T C G A G T C C G T A A C G T A C T G G T C A A G T C C G T A G T C A
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.923
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 29.5bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGTCATGCTGGCCAC
-NNTCCTGCTGTGNNN
 A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A T G C A C G T A C T G A T C G A G T C A G T C C G T A A T G C
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTGTCATGCTGGCCAC
--GTCATN--------
 A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A T G C A C G T A C T G A T C G A G T C A G T C C G T A A T G C
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGTCATGCTGGCCAC
-TCNCCTGCTGNGNNN
 A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A T G C A C G T A C T G A T C G A G T C A G T C C G T A A T G C
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGTCATGCTGGCCAC
NTGTCAN---------
 A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A T G C A C G T A C T G A T C G A G T C A G T C C G T A A T G C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGTCATGCTGGCCAC
-AGTCACGC-------
 A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A T G C A C G T A C T G A T C G A G T C A G T C C G T A A T G C
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGTCATGCTGGCCAC
-GGTCANNGTGACCTN
 A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A T G C A C G T A C T G A T C G A G T C A G T C C G T A A T G C
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTCATGCTGGCCAC
NNAATTAGTCACGGT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A T G C A C G T A C T G A T C G A G T C A G T C C G T A A T G C
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGTCATGCTGGCCAC
-TNTCCTGCTGTGNNG
 A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A T G C A C G T A C T G A T C G A G T C A G T C C G T A A T G C
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTGTCATGCTGGCCAC
YTGWCADY--------
 A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A T G C A C G T A C T G A T C G A G T C A G T C C G T A A T G C
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTGTCATGCTGGCCAC
TTGGCATGGTGCCA--
 A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A T G C A C G T A C T G A T C G A G T C A G T C C G T A A T G C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T