Information for 4-SYTSCCTTCSTTGASS (Motif 12)

A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T A G T C A T C G A C G T A C G T A T C G C G T A A T C G A T G C
Reverse Opposite:
A T C G A T G C A C G T A T G C C G T A C G T A A T G C C T A G C G T A C T G A A C T G A C T G A T C G C G T A C T A G A T C G
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.3 +/- 24.5bp
Average Position of motif in Background57.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----SYTSCCTTCSTTGASS
CCTTCCTTCCTTCCTTCC--
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T A G T C A T C G A C G T A C G T A T C G C G T A A T C G A T G C
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:SYTSCCTTCSTTGASS
----CCTTTGTT----
 A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T A G T C A T C G A C G T A C G T A T C G C G T A A T C G A T G C
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:SYTSCCTTCSTTGASS
----GCTTCC------
 A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T A G T C A T C G A C G T A C G T A T C G C G T A A T C G A T G C
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---SYTSCCTTCSTTGASS
NNACTTGCCTT--------
 A C G T A C G T A C G T A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T A G T C A T C G A C G T A C G T A T C G C G T A A T C G A T G C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:SYTSCCTTCSTTGASS-
-----TGACCTTGACCT
 A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T A G T C A T C G A C G T A C G T A T C G C G T A A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:SYTSCCTTCSTTGASS---
-----TTTCCTAGAAAGCA
 A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T A G T C A T C G A C G T A C G T A T C G C G T A A T C G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:SYTSCCTTCSTTGASS--
-TGACCTTTCGTGACCTT
 A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T A G T C A T C G A C G T A C G T A T C G C G T A A T C G A T G C A C G T A C G T
A C G T A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:SYTSCCTTCSTTGASS
----ACTTCCTGBT--
 A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T A G T C A T C G A C G T A C G T A T C G C G T A A T C G A T G C
A C G T A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:SYTSCCTTCSTTGASS--
--NNCATTCATTCATNNN
 A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T A G T C A T C G A C G T A C G T A T C G C G T A A T C G A T G C A C G T A C G T
A C G T A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:SYTSCCTTCSTTGASS
----ACTTCCTGNT--
 A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T A G T C A T C G A C G T A C G T A T C G C G T A A T C G A T G C
A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T