Information for 2-TCAGGCTGCTTGGTTK (Motif 7)

A C G T A T G C C G T A A C T G T A C G A G T C A C G T A T C G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
Reverse Opposite:
G T C A G T C A T G C A G T A C G T A C G T C A C G T A A C T G A T G C C G T A A C T G A G T C G T A C C G A T A T C G G T C A
p-value:1e-11
log p-value:-2.535e+01
Information Content per bp:1.793
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 16.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCAGGCTGCTTGGTTK
-CCCCCTGCTGTG---
 A C G T A T G C C G T A A C T G T A C G A G T C A C G T A T C G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TCAGGCTGCTTGGTTK----
-----CTGATTGGTCNATTT
 A C G T A T G C C G T A A C T G T A C G A G T C A C G T A T C G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCAGGCTGCTTGGTTK
-TNTCCTGCTGTGNNG
 A C G T A T G C C G T A A C T G T A C G A G T C A C G T A T C G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCAGGCTGCTTGGTTK-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A T G C C G T A A C T G T A C G A G T C A C G T A T C G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCAGGCTGCTTGGTTK
-TCNCCTGCTGNGNNN
 A C G T A T G C C G T A A C T G T A C G A G T C A C G T A T C G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCAGGCTGCTTGGTTK
--AGGVNCCTTTGT--
 A C G T A T G C C G T A A C T G T A C G A G T C A C G T A T C G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCAGGCTGCTTGGTTK
-NNTCCTGCTGTGNNN
 A C G T A T G C C G T A A C T G T A C G A G T C A C G T A T C G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCAGGCTGCTTGGTTK
GGCCYCCTGCTGDGH--
 A C G T A C G T A T G C C G T A A C T G T A C G A G T C A C G T A T C G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCAGGCTGCTTGGTTK-
--RGSMTBCTGGGAAAT
 A C G T A T G C C G T A A C T G T A C G A G T C A C G T A T C G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TCAGGCTGCTTGGTTK
-----CCGATTGGCT-
 A C G T A T G C C G T A A C T G T A C G A G T C A C G T A T C G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T