Information for 8-GGGCTTTGCCCTT (Motif 14)

A T C G A C T G A C T G A G T C A C G T A C G T A C G T A T C G A T G C A G T C A G T C A C G T A G C T
Reverse Opposite:
C T G A C G T A A C T G A C T G A T C G A T G C C G T A C G T A C G T A A C T G A G T C A G T C A T G C
p-value:1e-8
log p-value:-1.963e+01
Information Content per bp:1.913
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 18.3bp
Average Position of motif in Background61.4 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTTTGCCCTT-
TGGACTTTGNNCTCN
 A C G T A T C G A C T G A C T G A G T C A C G T A C G T A C G T A T C G A T G C A G T C A G T C A C G T A G C T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTTTGCCCTT--
TGGACTTTGNNCTNTG
 A C G T A T C G A C T G A C T G A G T C A C G T A C G T A C G T A T C G A T G C A G T C A G T C A C G T A G C T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGGCTTTGCCCTT
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C A C G T A C G T A C G T A T C G A T G C A G T C A G T C A C G T A G C T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTTTGCCCTT
TGACCTTTGCCCTA
 A C G T A T C G A C T G A C T G A G T C A C G T A C G T A C G T A T C G A T G C A G T C A G T C A C G T A G C T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

NFKB2/MA0778.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGCTTTGCCCTT
AGGGGATTCCCCT-
 A C G T A T C G A C T G A C T G A G T C A C G T A C G T A C G T A T C G A T G C A G T C A G T C A C G T A G C T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTTTGCCCTT-
TGACCTTTGCCCTAN
 A C G T A T C G A C T G A C T G A G T C A C G T A C G T A C G T A T C G A T G C A G T C A G T C A C G T A G C T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGCTTTGCCCTT
GGGGATTTCC----
 A C G T A T C G A C T G A C T G A G T C A C G T A C G T A C G T A T C G A T G C A G T C A G T C A C G T A G C T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGCTTTGCCCTT
GGGGATTCCCCC-
 A T C G A C T G A C T G A G T C A C G T A C G T A C G T A T C G A T G C A G T C A G T C A C G T A G C T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGCTTTGCCCTT
GGGGATTTCC---
 A T C G A C T G A C T G A G T C A C G T A C G T A C G T A T C G A T G C A G T C A G T C A C G T A G C T
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGGCTTTGCCCTT
NGGGGATTTCCC---
 A C G T A C G T A T C G A C T G A C T G A G T C A C G T A C G T A C G T A T C G A T G C A G T C A G T C A C G T A G C T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T