Information for 1-TCTGACCTCTCTC (Motif 1)

A C G T A G T C A C G T A C T G C T G A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A A C T G C G T A C T A G C G T A A C T G A C T G A G C T A G T C C G T A A C T G C G T A
p-value:1e-13
log p-value:-3.126e+01
Information Content per bp:1.933
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 22.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TCTGACCTCTCTC
--TGACCYCT---
 A C G T A G T C A C G T A C T G C T G A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A T G C
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCTGACCTCTCTC
--TGACCTYA---
 A C G T A G T C A C G T A C T G C T G A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A T G C
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCTGACCTCTCTC
-CTGACCTTTG--
 A C G T A G T C A C G T A C T G C T G A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A T G C
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCTGACCTCTCTC-
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C A C G T A C T G C T G A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A T G C A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCTGACCTCTCTC-
--TGACCTTTNCNT
 A C G T A G T C A C G T A C T G C T G A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A T G C A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCTGACCTCTCTC
CNNTTGACCTTTG--
 A C G T A C G T A C G T A G T C A C G T A C T G C T G A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A T G C
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCTGACCTCTCTC
--TGACCTTGAT-
 A C G T A G T C A C G T A C T G C T G A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A T G C
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCTGACCTCTCTC-
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C T G A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A T G C A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCTGACCTCTCTC
--TGACCT-----
 A C G T A G T C A C G T A C T G C T G A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A T G C
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCTGACCTCTCTC----
--TGACCTTTGCCCTAN
 A C G T A G T C A C G T A C T G C T G A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C