Information for 4-TATTGMTKGTRRTKGC (Motif 6)

C G A T G T C A C G A T A C G T T A C G G T C A A C G T A C T G A T C G A C G T C T G A C T A G G A C T A C T G T C A G A G T C
Reverse Opposite:
C T A G A G T C G T A C C T G A A G T C A G C T G T C A T A G C G T A C C G T A C A G T A T G C T C G A G C T A C A G T G C T A
p-value:1e-8
log p-value:-1.953e+01
Information Content per bp:1.635
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif9.80%
Number of Background Sequences with motif51.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets55.0 +/- 29.2bp
Average Position of motif in Background49.2 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TATTGMTKGTRRTKGC-
-------GTTAATGGCC
 C G A T G T C A C G A T A C G T T A C G G T C A A C G T A C T G A T C G A C G T C T G A C T A G G A C T A C T G T C A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TATTGMTKGTRRTKGC-----
-RTTKCADNNKRTTGCATNAN
 C G A T G T C A C G A T A C G T T A C G G T C A A C G T A C T G A T C G A C G T C T G A C T A G G A C T A C T G T C A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TATTGMTKGTRRTKGC
ANTATCGATTTTTN----
 A C G T A C G T C G A T G T C A C G A T A C G T T A C G G T C A A C G T A C T G A T C G A C G T C T G A C T A G G A C T A C T G T C A G A G T C
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TATTGMTKGTRRTKGC
NTTATTGATTTTTT----
 A C G T A C G T C G A T G T C A C G A T A C G T T A C G G T C A A C G T A C T G A T C G A C G T C T G A C T A G G A C T A C T G T C A G A G T C
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T A C G T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TATTGMTKGTRRTKGC
ATTATCGATTTTTT----
 A C G T A C G T C G A T G T C A C G A T A C G T T A C G G T C A A C G T A C T G A T C G A C G T C T G A C T A G G A C T A C T G T C A G A G T C
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TATTGMTKGTRRTKGC----
----TTTATTAATTGCNNGN
 C G A T G T C A C G A T A C G T T A C G G T C A A C G T A C T G A T C G A C G T C T G A C T A G G A C T A C T G T C A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:TATTGMTKGTRRTKGC
------TTTTTATTGC
 C G A T G T C A C G A T A C G T T A C G G T C A A C G T A C T G A T C G A C G T C T G A C T A G G A C T A C T G T C A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-TATTGMTKGTRRTKGC
NTATYGATCH-------
 A C G T C G A T G T C A C G A T A C G T T A C G G T C A A C G T A C T G A T C G A C G T C T G A C T A G G A C T A C T G T C A G A G T C
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----TATTGMTKGTRRTKGC
NNNNNATTGATGNGTGN---
 A C G T A C G T A C G T A C G T C G A T G T C A C G A T A C G T T A C G G T C A A C G T A C T G A T C G A C G T C T G A C T A G G A C T A C T G T C A G A G T C
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:TATTGMTKGTRRTKGC
-ATTGATTYND-----
 C G A T G T C A C G A T A C G T T A C G G T C A A C G T A C T G A T C G A C G T C T G A C T A G G A C T A C T G T C A G A G T C
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T A C G T A C G T A C G T