Information for 3-TYTKYCWGYCYSWCTG (Motif 3)

A C G T A G C T A C G T A C T G A G C T A G T C C G A T A C T G A G C T A G T C A G C T A T C G G C A T A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G C G T A A T G C C T G A A C T G C T G A T A G C C G T A A C T G C T G A T G A C C G T A C T G A G T C A
p-value:1e-9
log p-value:-2.235e+01
Information Content per bp:1.797
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.7 +/- 11.6bp
Average Position of motif in Background56.3 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TYTKYCWGYCYSWCTG-
NAGTTTCABTHTGACTNW
 A C G T A C G T A G C T A C G T A C T G A G C T A G T C C G A T A C T G A G C T A G T C A G C T A T C G G C A T A G T C A C G T A C T G A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TYTKYCWGYCYSWCTG
-CTTTCANTATGACTV
 A C G T A G C T A C G T A C T G A G C T A G T C C G A T A C T G A G C T A G T C A G C T A T C G G C A T A G T C A C G T A C T G
A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TYTKYCWGYCYSWCTG-
--GTCATGCHTGRCTGS
 A C G T A G C T A C G T A C T G A G C T A G T C C G A T A C T G A G C T A G T C A G C T A T C G G C A T A G T C A C G T A C T G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TYTKYCWGYCYSWCTG-
-------VBSYGTCTGG
 A C G T A G C T A C G T A C T G A G C T A G T C C G A T A C T G A G C T A G T C A G C T A T C G G C A T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:9
Orientation:forward strand
Alignment:TYTKYCWGYCYSWCTG-
---------CTGTCTGG
 A C G T A G C T A C G T A C T G A G C T A G T C C G A T A C T G A G C T A G T C A G C T A T C G G C A T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TYTKYCWGYCYSWCTG------
--TTTMCGCTTSABTGAACACN
 A C G T A G C T A C G T A C T G A G C T A G T C C G A T A C T G A G C T A G T C A G C T A T C G G C A T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TYTKYCWGYCYSWCTG
TTTTCCA---------
 A C G T A G C T A C G T A C T G A G C T A G T C C G A T A C T G A G C T A G T C A G C T A T C G G C A T A G T C A C G T A C T G
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-TYTKYCWGYCYSWCTG
CACTTCCTGT-------
 A C G T A C G T A G C T A C G T A C T G A G C T A G T C C G A T A C T G A G C T A G T C A G C T A T C G G C A T A G T C A C G T A C T G
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:TYTKYCWGYCYSWCTG
ATTTCCTGTN------
 A C G T A G C T A C G T A C T G A G C T A G T C C G A T A C T G A G C T A G T C A G C T A T C G G C A T A G T C A C G T A C T G
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:TYTKYCWGYCYSWCTG
--TTCCCGCCWG----
 A C G T A G C T A C G T A C T G A G C T A G T C C G A T A C T G A G C T A G T C A G C T A T C G G C A T A G T C A C G T A C T G
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T