p-value: | 1e-6 |
log p-value: | -1.526e+01 |
Information Content per bp: | 1.865 |
Number of Target Sequences with motif | 15.0 |
Percentage of Target Sequences with motif | 1.91% |
Number of Background Sequences with motif | 170.1 |
Percentage of Background Sequences with motif | 0.35% |
Average Position of motif in Targets | 50.7 +/- 26.0bp |
Average Position of motif in Background | 50.7 +/- 30.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTGCAGGCTG- ---TWGTCTGV |
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MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGCAGGCTG- -TGCTGACTCA |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTGCAGGCTG-- DCHCAGCAGGRGGCC |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCAGGCTG CACAGCAGGGGG |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTGCAGGCTG--- ---CCTGCTGAGH |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTGCAGGCTG --CCAGACAG |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CTGCAGGCTG -----NGCTN |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CTGCAGGCTG-- ------GCTGTG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTGCAGGCTG-- --CCAGACRSVB |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGCAGGCTG----- TCNCCTGCTGNGNNN |
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