Information for 4-ACAGAGCAGGGCTCTC (Motif 7)

C T G A G T A C G T C A A T C G C G T A A T C G A G T C G T C A A T C G A C T G A C T G A T G C A G C T A G T C A C G T A G T C
Reverse Opposite:
C T A G C G T A C T A G C T G A A T C G A G T C A G T C A T G C C A G T A C T G T A G C A C G T A T G C A C G T A C T G A G C T
p-value:1e-12
log p-value:-2.844e+01
Information Content per bp:1.821
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 28.8bp
Average Position of motif in Background29.0 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACAGAGCAGGGCTCTC
NNAGGGACAAGGGCNC--
 A C G T A C G T C T G A G T A C G T C A A T C G C G T A A T C G A G T C G T C A A T C G A C T G A C T G A T G C A G C T A G T C A C G T A G T C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.51
Offset:1
Orientation:forward strand
Alignment:ACAGAGCAGGGCTCTC
-CACAGCAGGGGG---
 C T G A G T A C G T C A A T C G C G T A A T C G A G T C G T C A A T C G A C T G A C T G A T G C A G C T A G T C A C G T A G T C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--ACAGAGCAGGGCTCTC
CCACACAGCAGGAGA---
 A C G T A C G T C T G A G T A C G T C A A T C G C G T A A T C G A G T C G T C A A T C G A C T G A C T G A T G C A G C T A G T C A C G T A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:ACAGAGCAGGGCTCTC
DCHCAGCAGGRGGCC-
 C T G A G T A C G T C A A T C G C G T A A T C G A G T C G T C A A T C G A C T G A C T G A T G C A G C T A G T C A C G T A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.49
Offset:0
Orientation:forward strand
Alignment:ACAGAGCAGGGCTCTC
GCCGCGCAGTGCGT--
 C T G A G T A C G T C A A T C G C G T A A T C G A G T C G T C A A T C G A C T G A C T G A T G C A G C T A G T C A C G T A G T C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.48
Offset:0
Orientation:forward strand
Alignment:ACAGAGCAGGGCTCTC
ACATGCCCGGGCAT--
 C T G A G T A C G T C A A T C G C G T A A T C G A G T C G T C A A T C G A C T G A C T G A T G C A G C T A G T C A C G T A G T C
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--ACAGAGCAGGGCTCTC
GAGCACAGCAGGACA---
 A C G T A C G T C T G A G T A C G T C A A T C G C G T A A T C G A G T C G T C A A T C G A C T G A C T G A T G C A G C T A G T C A C G T A G T C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--ACAGAGCAGGGCTCTC
CCACACAGCAGGAGA---
 A C G T A C G T C T G A G T A C G T C A A T C G C G T A A T C G A G T C G T C A A T C G A C T G A C T G A T G C A G C T A G T C A C G T A G T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:ACAGAGCAGGGCTCTC
DCTCAGCAGG------
 C T G A G T A C G T C A A T C G C G T A A T C G A G T C G T C A A T C G A C T G A C T G A T G C A G C T A G T C A C G T A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.46
Offset:2
Orientation:forward strand
Alignment:ACAGAGCAGGGCTCTC---
--CGAACAGTGCTCACTAT
 C T G A G T A C G T C A A T C G C G T A A T C G A G T C G T C A A T C G A C T G A C T G A T G C A G C T A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T