Information for 3-TGGTCATCTCCTCCCT (Motif 6)

A C G T A C T G A T C G A C G T A G T C C G T A A C G T A G T C C G A T A G T C A G T C G C A T A G T C A G T C A G T C A G C T
Reverse Opposite:
C T G A C T A G A C T G T A C G C G T A C T A G A C T G G C T A T A C G G T C A A C G T C T A G C G T A A T G C A G T C C G T A
p-value:1e-13
log p-value:-3.021e+01
Information Content per bp:1.796
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.9 +/- 26.9bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGGTCATCTCCTCCCT
GARTGGTCATCGCCC----
 A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C C G T A A C G T A G T C C G A T A G T C A G T C G C A T A G T C A G T C A G T C A G C T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGGTCATCTCCTCCCT
--GTCATN--------
 A C G T A C T G A T C G A C G T A G T C C G T A A C G T A G T C C G A T A G T C A G T C G C A T A G T C A G T C A G T C A G C T
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGTCATCTCCTCCCT
AGGTCA----------
 A C G T A C T G A T C G A C G T A G T C C G T A A C G T A G T C C G A T A G T C A G T C G C A T A G T C A G T C A G T C A G C T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGGTCATCTCCTCCCT
AGRGGTCA----------
 A C G T A C G T A C G T A C T G A T C G A C G T A G T C C G T A A C G T A G T C C G A T A G T C A G T C G C A T A G T C A G T C A G T C A G C T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGGTCATCTCCTCCCT
----CAGCTGTTTCCT
 A C G T A C T G A T C G A C G T A G T C C G T A A C G T A G T C C G A T A G T C A G T C G C A T A G T C A G T C A G T C A G C T
A C G T A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGGTCATCTCCTCCCT----
CCTCATGGTGYCYTWYTCCCTTGTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C C G T A A C G T A G T C C G A T A G T C A G T C G C A T A G T C A G T C A G T C A G C T A C G T A C G T A C G T A C G T
T A G C G A T C A G C T T G A C G C T A A G C T C A T G A C T G A C G T T C A G A G T C G A T C G A C T A G C T G C T A A G T C A G C T A G T C G A T C A T G C A G C T G A C T C A T G A C G T A T C G

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TGGTCATCTCCTCCCT
ATCAAGGTCA----------
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C C G T A A C G T A G T C C G A T A G T C A G T C G C A T A G T C A G T C A G T C A G C T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TGGTCATCTCCTCCCT
TRAGGTCA----------
 A C G T A C G T A C G T A C T G A T C G A C G T A G T C C G T A A C G T A G T C C G A T A G T C A G T C G C A T A G T C A G T C A G T C A G C T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TGGTCATCTCCTCCCT
TAGTGATCATCATTA----
 A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C C G T A A C G T A G T C C G A T A G T C A G T C G C A T A G T C A G T C A G T C A G C T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGTCATCTCCTCCCT
AGGTCACCCTGACCT-
 A C G T A C T G A T C G A C G T A G T C C G T A A C G T A G T C C G A T A G T C A G T C G C A T A G T C A G T C A G T C A G C T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T