Information for 4-AAAAAGAGAAGTA (Motif 3)

C T G A C T G A G T C A G C T A C T G A T C A G C G T A A C T G G T C A C G T A T C A G A G C T T G C A
Reverse Opposite:
A C G T T C G A A G T C G A C T A C G T A G T C G C A T A G T C G A C T C G A T A C G T A G C T A G C T
p-value:1e-15
log p-value:-3.505e+01
Information Content per bp:1.754
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.53%
Number of Background Sequences with motif80.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets46.3 +/- 27.7bp
Average Position of motif in Background47.5 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIC/MA0687.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AAAAAGAGAAGTA
AAAAAGAGGAAGTA
 A C G T C T G A C T G A G T C A G C T A C T G A T C A G C G T A A C T G G T C A C G T A T C A G A G C T T G C A
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

SPI1/MA0080.4/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAAAAGAGAAGTA
AAAAAGCGGAAGTA
 A C G T C T G A C T G A G T C A G C T A C T G A T C A G C G T A A C T G G T C A C G T A T C A G A G C T T G C A
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AAAAAGAGAAGTA
-AAAGRGGAAGTG
 C T G A C T G A G T C A G C T A C T G A T C A G C G T A A C T G G T C A C G T A T C A G A G C T T G C A
A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAGAGAAGTA
ATGCTAAAAATAGAA---
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T C A G C T A C T G A T C A G C G T A A C T G G T C A C G T A T C A G A G C T T G C A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAAAGAGAAGTA-
TTAAGAGGAAGTTA
 C T G A C T G A G T C A G C T A C T G A T C A G C G T A A C T G G T C A C G T A T C A G A G C T T G C A A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAAAAGAGAAGTA
DCYAAAAATAGM----
 A C G T A C G T A C G T C T G A C T G A G T C A G C T A C T G A T C A G C G T A A C T G G T C A C G T A T C A G A G C T T G C A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAAAGAGAAGTA
TCTAAAAATAGA----
 A C G T A C G T A C G T C T G A C T G A G T C A G C T A C T G A T C A G C G T A A C T G G T C A C G T A T C A G A G C T T G C A
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AAAAAGAGAAGTA
------NGAAGC-
 C T G A C T G A G T C A G C T A C T G A T C A G C G T A A C T G G T C A C G T A T C A G A G C T T G C A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAAAAGAGAAGTA
--ANAGATAAGAA
 C T G A C T G A G T C A G C T A C T G A T C A G C G T A A C T G G T C A C G T A T C A G A G C T T G C A
A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AAAAAGAGAAGTA
GCTAAAAATAGC----
 A C G T A C G T A C G T C T G A C T G A G T C A G C T A C T G A T C A G C G T A A C T G G T C A C G T A T C A G A G C T T G C A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T