Information for 13-AAAGATATTG (Motif 18)

C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T A C G T
p-value:1e-5
log p-value:-1.344e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 20.8bp
Average Position of motif in Background59.6 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AAAGATATTG-
AAGGATATNTN
 C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAAGATATTG------
NAAANTTATTGAANCAN
 A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Sox1/MA0870.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AAAGATATTG--
AACAATGNTATTGTT
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G A C G T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAGATATTG----
GACAGAGATATCAGTGT
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAGATATTG-----
-CTAATATTGCTAAA
 C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAGATATTG-----
-CTAATATTGCTAAA
 C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAGATATTG-------
-AANTTATTGTTCTNNA
 C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAAGATATTG
--AGATAASR
 C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G
A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

BHLHE23/MA0817.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAGATATTG--
AAACATATGTTT
 C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G A C G T A C G T
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAGATATTG
--AGATAAGA
 C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G
A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A