Information for 6-GGYKGCAGGCAGCAAA (Motif 14)

A C T G A T C G G A C T A C T G A T C G A G T C C G T A A C T G A T C G G T A C C G T A A C T G A T G C C G T A T C G A C G T A
Reverse Opposite:
A C G T A C G T A C G T A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C T G T A G C G T A C C T G A A T G C A G T C
p-value:1e-9
log p-value:-2.195e+01
Information Content per bp:1.750
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 25.6bp
Average Position of motif in Background21.4 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGYKGCAGGCAGCAAA
AGGTGNCAGACAG----
 A C G T A C T G A T C G G A C T A C T G A T C G A G T C C G T A A C T G A T C G G T A C C G T A A C T G A T G C C G T A T C G A C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGYKGCAGGCAGCAAA
----ACAGGAAGTG--
 A C T G A T C G G A C T A C T G A T C G A G T C C G T A A C T G A T C G G T A C C G T A A C T G A T G C C G T A T C G A C G T A
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGYKGCAGGCAGCAAA-
-NNTGTAGGTAGCANNT
 A C T G A T C G G A C T A C T G A T C G A G T C C G T A A C T G A T C G G T A C C G T A A C T G A T G C C G T A T C G A C G T A A C G T
A C G T A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGYKGCAGGCAGCAAA
----TGAGTCAGCA--
 A C T G A T C G G A C T A C T G A T C G A G T C C G T A A C T G A T C G G T A C C G T A A C T G A T G C C G T A T C G A C G T A
A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGYKGCAGGCAGCAAA-
-NNNTTAGGTAGCNTNT
 A C T G A T C G G A C T A C T G A T C G A G T C C G T A A C T G A T C G G T A C C G T A A C T G A T G C C G T A T C G A C G T A A C G T
A C G T A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GGYKGCAGGCAGCAAA--
-------GTCAGCANNTN
 A C T G A T C G G A C T A C T G A T C G A G T C C G T A A C T G A T C G G T A C C G T A A C T G A T G C C G T A T C G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGYKGCAGGCAGCAAA
--TGGCAGNCTGCCAG
 A C T G A T C G G A C T A C T G A T C G A G T C C G T A A C T G A T C G G T A C C G T A A C T G A T G C C G T A T C G A C G T A
A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGYKGCAGGCAGCAAA--
------AGGAAACAGCTG
 A C T G A T C G G A C T A C T G A T C G A G T C C G T A A C T G A T C G G T A C C G T A A C T G A T G C C G T A T C G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGYKGCAGGCAGCAAA
AGGTGHCAGACA-----
 A C G T A C T G A T C G G A C T A C T G A T C G A G T C C G T A A C T G A T C G G T A C C G T A A C T G A T G C C G T A T C G A C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGYKGCAGGCAGCAAA----
-----AAGTCAGCANTTTTN
 A C T G A T C G G A C T A C T G A T C G A G T C C G T A A C T G A T C G G T A C C G T A A C T G A T G C C G T A T C G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A