Information for 13-TTGCCAAATTGAA (Motif 12)

A C G T C A G T C T A G A G T C G A T C G C T A G T C A G T C A G A C T C G A T A C T G G T C A T C G A
Reverse Opposite:
A C G T C A G T T A G C G C T A C T G A C A G T C A G T C A G T C T A G C T A G G A T C G T C A T G C A
p-value:1e-10
log p-value:-2.357e+01
Information Content per bp:1.657
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif246.2
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets42.0 +/- 25.1bp
Average Position of motif in Background50.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTGCCAAATTGAA----
-TGCCAAAATAAACANN
 A C G T C A G T C T A G A G T C G A T C G C T A G T C A G T C A G A C T C G A T A C T G G T C A T C G A A C G T A C G T A C G T A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAATTGAA
GGTGCCAAGT----
 A C G T A C G T C A G T C T A G A G T C G A T C G C T A G T C A G T C A G A C T C G A T A C T G G T C A T C G A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAATTGAA
ATTGCACAATA---
 A C G T A C G T C A G T C T A G A G T C G A T C G C T A G T C A G T C A G A C T C G A T A C T G G T C A T C G A
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCAAATTGAA
GTTGCGCAAT----
 A C G T A C G T C A G T C T A G A G T C G A T C G C T A G T C A G T C A G A C T C G A T A C T G G T C A T C G A
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAATTGAA
CGTGCCAAG-----
 A C G T A C G T C A G T C T A G A G T C G A T C G C T A G T C A G T C A G A C T C G A T A C T G G T C A T C G A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTGCCAAATTGAA------
---NNNTATTGAATTGNNN
 A C G T C A G T C T A G A G T C G A T C G C T A G T C A G T C A G A C T C G A T A C T G G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGCCAAATTGAA
-TGCCAA------
 A C G T C A G T C T A G A G T C G A T C G C T A G T C A G T C A G A C T C G A T A C T G G T C A T C G A
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGCCAAATTGAA--
BAGTCATANTGAAAG
 A C G T C A G T C T A G A G T C G A T C G C T A G T C A G T C A G A C T C G A T A C T G G T C A T C G A A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCAAATTGAA----
WNAGTCADAVTGAAACTN
 A C G T A C G T C A G T C T A G A G T C G A T C G C T A G T C A G T C A G A C T C G A T A C T G G T C A T C G A A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTGCCAAATTGAA
CAATTGCAAAAATAT-
 A C G T A C G T A C G T A C G T C A G T C T A G A G T C G A T C G C T A G T C A G T C A G A C T C G A T A C T G G T C A T C G A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T