Information for 12-GGGCAGAGGCCGG (Motif 11)

A C T G C T A G A C T G A G T C C G T A A C T G C T G A A C T G A C T G A G T C T A G C C T A G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C T G A G T C A G T C A G C T A G T C A C G T A C T G A G T C A G T C A G T C
p-value:1e-10
log p-value:-2.364e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.7 +/- 32.1bp
Average Position of motif in Background47.5 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGGCAGAGGCCGG
TAGGGCAAAGGTCA-
 A C G T A C G T A C T G C T A G A C T G A G T C C G T A A C T G C T G A A C T G A C T G A G T C T A G C C T A G A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGGCCGG
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C T G C T A G A C T G A G T C C G T A A C T G C T G A A C T G A C T G A G T C T A G C C T A G A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGGCCGG
AGGGGTCAGAGGTCA-
 A C G T A C G T A C G T A C T G C T A G A C T G A G T C C G T A A C T G C T G A A C T G A C T G A G T C T A G C C T A G A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGCAGAGGCCGG--
GGGNGGGGGCGGGGC
 A C T G C T A G A C T G A G T C C G T A A C T G C T G A A C T G A C T G A G T C T A G C C T A G A C T G A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAGAGGCCGG
TGGGGCAAAGGTCA-
 A C G T A C G T A C T G C T A G A C T G A G T C C G T A A C T G C T G A A C T G A C T G A G T C T A G C C T A G A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGAGGCCGG
TNNGGGCAG-------
 A C G T A C G T A C G T A C T G C T A G A C T G A G T C C G T A A C T G C T G A A C T G A C T G A G T C T A G C C T A G A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGCAGAGGCCGG
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G C T A G A C T G A G T C C G T A A C T G C T G A A C T G A C T G A G T C T A G C C T A G A C T G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGGCCGG
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C T G C T A G A C T G A G T C C G T A A C T G C T G A A C T G A C T G A G T C T A G C C T A G A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGCAGAGGCCGG
SDGCAGGTGCNS-
 A C T G C T A G A C T G A G T C C G T A A C T G C T G A A C T G A C T G A G T C T A G C C T A G A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGCAGAGGCCGG
GGGGCCGAGGCCTG
 A C G T A C T G C T A G A C T G A G T C C G T A A C T G C T G A A C T G A C T G A G T C T A G C C T A G A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G