Information for 18-AACMGAGTAAAGGAGG (Motif 20)

T C G A C G T A T G A C G T A C T C A G C G T A A C T G C A G T G T C A G T C A C G T A A C T G A T C G C T G A A C T G T A C G
Reverse Opposite:
A G T C A G T C A G C T A T G C G T A C A C G T A C G T A C G T G T C A G T A C A C G T A G T C A C T G A C T G A C G T A G C T
p-value:1e-9
log p-value:-2.086e+01
Information Content per bp:1.726
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif28.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.9 +/- 28.4bp
Average Position of motif in Background50.9 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf7/MA0769.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AACMGAGTAAAGGAGG
-AAAGATCAAAGG---
 T C G A C G T A T G A C G T A C T C A G C G T A A C T G C A G T G T C A G T C A C G T A A C T G A T C G C T G A A C T G T A C G
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AACMGAGTAAAGGAGG
GGAAGGAAGGAAGGAAGG
 A C G T A C G T T C G A C G T A T G A C G T A C T C A G C G T A A C T G C A G T G T C A G T C A C G T A A C T G A T C G C T G A A C T G T A C G
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AACMGAGTAAAGGAGG-
NANAGATCAAAGGGNNN
 T C G A C G T A T G A C G T A C T C A G C G T A A C T G C A G T G T C A G T C A C G T A A C T G A T C G C T G A A C T G T A C G A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AACMGAGTAAAGGAGG-
NNNAGATCAAAGGANNN
 T C G A C G T A T G A C G T A C T C A G C G T A A C T G C A G T G T C A G T C A C G T A A C T G A T C G C T G A A C T G T A C G A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AACMGAGTAAAGGAGG
-AAAGATCAAAGGAA-
 T C G A C G T A T G A C G T A C T C A G C G T A A C T G C A G T G T C A G T C A C G T A A C T G A T C G C T G A A C T G T A C G
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T

LEF1/MA0768.1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AACMGAGTAAAGGAGG
-AAAGATCAAAGGGTT
 T C G A C G T A T G A C G T A C T C A G C G T A A C T G C A G T G T C A G T C A C G T A A C T G A T C G C T G A A C T G T A C G
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.50
Offset:7
Orientation:forward strand
Alignment:AACMGAGTAAAGGAGG---
-------CACAGCAGGGGG
 T C G A C G T A T G A C G T A C T C A G C G T A A C T G C A G T G T C A G T C A C G T A A C T G A T C G C T G A A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Hmx3/MA0898.1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AACMGAGTAAAGGAGG
ACAAGCAATTAAAGAAT-
 A C G T A C G T T C G A C G T A T G A C G T A C T C A G C G T A A C T G C A G T G T C A G T C A C G T A A C T G A T C G C T G A A C T G T A C G
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AACMGAGTAAAGGAGG
ACAAGCAATTAAAGAAT-
 A C G T A C G T T C G A C G T A T G A C G T A C T C A G C G T A A C T G C A G T G T C A G T C A C G T A A C T G A T C G C T G A A C T G T A C G
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AACMGAGTAAAGGAGG
ACAAGCAATTAAAGAAT-
 A C G T A C G T T C G A C G T A T G A C G T A C T C A G C G T A A C T G C A G T G T C A G T C A C G T A A C T G A T C G C T G A A C T G T A C G
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T A C G T