Information for 12-CWTAKGAGKGKGTWMA (Motif 12)

A G T C C G T A C G A T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T C G A T G T A C C G T A
Reverse Opposite:
A C G T C A T G C G T A C G T A A G T C G T C A A G T C G T C A A G T C A C G T A G T C G T C A C G A T C G T A C G A T A C T G
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 11.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CWTAKGAGKGKGTWMA-
-TGCGGAGTGGGACTGG
 A G T C C G T A C G A T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T C G A T G T A C C G T A A C G T
A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CWTAKGAGKGKGTWMA
---TTGAGTGSTT---
 A G T C C G T A C G A T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T C G A T G T A C C G T A
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CWTAKGAGKGKGTWMA
--CTTGAGTGGCT---
 A G T C C G T A C G A T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T C G A T G T A C C G T A
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CWTAKGAGKGKGTWMA
------AAGGTGTKAA
 A G T C C G T A C G A T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T C G A T G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CWTAKGAGKGKGTWMA
----TGCGTGGGYG--
 A G T C C G T A C G A T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T C G A T G T A C C G T A
A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CWTAKGAGKGKGTWMA---
---NNGCGTGTGTGCNGCN
 A G T C C G T A C G A T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T C G A T G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CWTAKGAGKGKGTWMA
NTTNTATGAATGTGNNC-
 A C G T A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T C G A T G T A C C G T A
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CWTAKGAGKGKGTWMA
CTTCGTGGGGGGTC--
 A G T C C G T A C G A T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T C G A T G T A C C G T A
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CWTAKGAGKGKGTWMA
----GGAGGGGGAA--
 A G T C C G T A C G A T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T C G A T G T A C C G T A
A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CWTAKGAGKGKGTWMA
--TATGCGGGTA----
 A G T C C G T A C G A T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T C G A T G T A C C G T A
A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T