Information for 5-TGTGGTTTKR (Motif 3)

C G A T C T A G A C G T A C T G A C T G G A C T A C G T C A G T A C G T C T A G
Reverse Opposite:
G A T C T G C A G T C A G T C A C T G A A G T C A G T C C G T A A G T C C G T A
p-value:1e-32
log p-value:-7.461e+01
Information Content per bp:1.717
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif10.01%
Number of Background Sequences with motif828.4
Percentage of Background Sequences with motif1.72%
Average Position of motif in Targets49.8 +/- 26.8bp
Average Position of motif in Background50.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTKR
NNTGTGGTTT--
 A C G T A C G T C G A T C T A G A C G T A C T G A C T G G A C T A C G T C A G T A C G T C T A G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTTTKR
NNHTGTGGTTWN-
 A C G T A C G T A C G T C G A T C T A G A C G T A C T G A C T G G A C T A C G T C A G T A C G T C T A G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---TGTGGTTTKR
GTCTGTGGTTT--
 A C G T A C G T A C G T C G A T C T A G A C G T A C T G A C T G G A C T A C G T C A G T A C G T C T A G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTKR
CTGTGGTTTN-
 A C G T C G A T C T A G A C G T A C T G A C T G G A C T A C G T C A G T A C G T C T A G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTKR
GCTGTGGTTT--
 A C G T A C G T C G A T C T A G A C G T A C T G A C T G G A C T A C G T C A G T A C G T C T A G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTKR
TTTGCGGTTT--
 A C G T A C G T C G A T C T A G A C G T A C T G A C T G G A C T A C G T C A G T A C G T C T A G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTKR
TTGCGGTTT--
 A C G T C G A T C T A G A C G T A C T G A C T G G A C T A C G T C A G T A C G T C T A G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGTGGTTTKR-
TGTGGATTNNN
 C G A T C T A G A C G T A C T G A C T G G A C T A C G T C A G T A C G T C T A G A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TGTGGTTTKR
-GTGGAT---
 C G A T C T A G A C G T A C T G A C T G G A C T A C G T C A G T A C G T C T A G
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTKR
NNTGTGGATTSS
 A C G T A C G T C G A T C T A G A C G T A C T G A C T G G A C T A C G T C A G T A C G T C T A G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G