Information for 20-SSSCGCCMGCCAG (Motif 24)

A T G C A T G C A T C G A G T C A T C G A G T C A G T C G T C A A C T G A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C C T A G A T G C A T C G A T C G
p-value:1e-7
log p-value:-1.715e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.2 +/- 18.8bp
Average Position of motif in Background45.0 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----SSSCGCCMGCCAG
TACGCCCCGCCACTCTG
A C G T A C G T A C G T A C G T A T G C A T G C A T C G A G T C A T C G A G T C A G T C G T C A A C T G A G T C A G T C C G T A A C T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-SSSCGCCMGCCAG
AGCGCGCC------
A C G T A T G C A T G C A T C G A G T C A T C G A G T C A G T C G T C A A C T G A G T C A G T C C G T A A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-SSSCGCCMGCCAG
TGGCAGNCTGCCAG
A C G T A T G C A T G C A T C G A G T C A T C G A G T C A G T C G T C A A C T G A G T C A G T C C G T A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-SSSCGCCMGCCAG
GCCMCGCCCMCY--
A C G T A T G C A T G C A T C G A G T C A T C G A G T C A G T C G T C A A C T G A G T C A G T C C G T A A C T G
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:SSSCGCCMGCCAG
-----CCAGACAG
A T G C A T G C A T C G A G T C A T C G A G T C A G T C G T C A A C T G A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:SSSCGCCMGCCAG
-------TGCCAA
A T G C A T G C A T C G A G T C A T C G A G T C A G T C G T C A A C T G A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----SSSCGCCMGCCAG
NCANGCGCGCGCGCCA-
A C G T A C G T A C G T A C G T A T G C A T G C A T C G A G T C A T C G A G T C A G T C G T C A A C T G A G T C A G T C C G T A A C T G
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:SSSCGCCMGCCAG-
-----CGTGCCAAG
A T G C A T G C A T C G A G T C A T C G A G T C A G T C G T C A A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:SSSCGCCMGCCAG---
------ATGCCAGACN
A T G C A T G C A T C G A G T C A T C G A G T C A G T C G T C A A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:SSSCGCCMGCCAG
---TTCCCGCCWG
A T G C A T G C A T C G A G T C A T C G A G T C A G T C G T C A A C T G A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G