Information for 15-TTTAGTTTGCATT (Motif 20)

A C G T C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T
Reverse Opposite:
G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A A G T C A C G T C T G A C G T A C G T A
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 24.5bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0144.1_Pou2f2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTAGTTTGCATT---
TNTAATTTGCATANNN
 A C G T C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTTAGTTTGCATT-
-TTCATTTGCATAT
 A C G T C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Pou2f3/MA0627.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTAGTTTGCATT---
TNTAATTTGCATACNA
 A C G T C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTAGTTTGCATT---
TNTAATTTGCATACNA
 A C G T C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTTAGTTTGCATT
-BTVATTWGCATA
 A C G T C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTAGTTTGCATT
-CTCATTTGCATW
 A C G T C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTTAGTTTGCATT-
----ATTTGCATAA
 A C G T C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTAGTTTGCATT--
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTAGTTTGCATT--
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTAGTTTGCATT-
--TAATTTGCATAA
 A C G T C G A T A G C T C G T A A C T G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A