Information for 13-ATTCCTATTAAGG (Motif 18)

G T C A A C G T A C G T A G T C A G T C A G C T C G T A A C G T A C G T C G T A T G C A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T C G T A C G T A A C G T C T G A A C T G A C T G C G T A C G T A A C G T
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.5 +/- 28.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0135.1_Hoxa3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATTCCTATTAAGG
AAAAACCATTAAGG
 A C G T G T C A A C G T A C G T A G T C A G T C A G C T C G T A A C G T A C G T C G T A T G C A A C T G A C T G
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

PB0078.1_Srf_1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATTCCTATTAAGG--
-TNCCATATATGGNA
 G T C A A C G T A C G T A G T C A G T C A G C T C G T A A C G T A C G T C G T A T G C A A C T G A C T G A C G T A C G T
A C G T C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATTCCTATTAAGG
-TNCCATATATGG
 G T C A A C G T A C G T A G T C A G T C A G C T C G T A A C G T A C G T C G T A T G C A A C T G A C T G
A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

BCL6B/MA0731.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATTCCTATTAAGG-
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G C T C G T A A C G T A C G T C G T A T G C A A C T G A C T G A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

BSX/MA0876.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATTCCTATTAAGG
---CCAATTAA--
 G T C A A C G T A C G T A G T C A G T C A G C T C G T A A C G T A C G T C G T A T G C A A C T G A C T G
A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATTCCTATTAAGG
-TTCCTCT-----
 G T C A A C G T A C G T A G T C A G T C A G C T C G T A A C G T A C G T C G T A T G C A A C T G A C T G
A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ATTCCTATTAAGG
---CCAATTAA--
 G T C A A C G T A C G T A G T C A G T C A G C T C G T A A C G T A C G T C G T A T G C A A C T G A C T G
A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATTCCTATTAAGG
---GCAATTAG--
 G T C A A C G T A C G T A G T C A G T C A G C T C G T A A C G T A C G T C G T A T G C A A C T G A C T G
A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATTCCTATTAAGG
NNNATTCCTCGAAAGN
 A C G T A C G T A C G T G T C A A C G T A C G T A G T C A G T C A G C T C G T A A C G T A C G T C G T A T G C A A C T G A C T G
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

NKX6-2/MA0675.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATTCCTATTAAGG
---CTAATTAA--
 G T C A A C G T A C G T A G T C A G T C A G C T C G T A A C G T A C G T C G T A T G C A A C T G A C T G
A C G T A C G T A C G T A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T