Information for 10-TGTGACCTTAABATAV (Motif 12)

A C G T A T C G A C G T C T A G C G T A A T G C G A T C C G A T A C G T C G T A C G T A A G C T T G C A A C G T T C G A T A C G
Reverse Opposite:
A T G C A G C T C G T A A C G T T C G A C G A T A C G T T G C A C G T A C T A G A T C G A C G T A G T C C G T A A T G C C G T A
p-value:1e-10
log p-value:-2.340e+01
Information Content per bp:1.753
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 25.3bp
Average Position of motif in Background67.2 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGTGACCTTAABATAV
-GTGACCTT-------
 A C G T A T C G A C G T C T A G C G T A A T G C G A T C C G A T A C G T C G T A C G T A A G C T T G C A A C G T T C G A T A C G
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTGACCTTAABATAV
--TGACCTYA------
 A C G T A T C G A C G T C T A G C G T A A T G C G A T C C G A T A C G T C G T A C G T A A G C T T G C A A C G T T C G A T A C G
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTGACCTTAABATAV
--TGACCTTGAT----
 A C G T A T C G A C G T C T A G C G T A A T G C G A T C C G A T A C G T C G T A C G T A A G C T T G C A A C G T T C G A T A C G
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTGACCTTAABATAV
-NTGACCTTGA-----
 A C G T A T C G A C G T C T A G C G T A A T G C G A T C C G A T A C G T C G T A C G T A A G C T T G C A A C G T T C G A T A C G
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGTGACCTTAABATAV
--TGACCTTTNCNT--
 A C G T A T C G A C G T C T A G C G T A A T G C G A T C C G A T A C G T C G T A C G T A A G C T T G C A A C G T T C G A T A C G
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTGACCTTAABATAV
--TGACCT--------
 A C G T A T C G A C G T C T A G C G T A A T G C G A T C C G A T A C G T C G T A C G T A A G C T T G C A A C G T T C G A T A C G
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGTGACCTTAABATAV
-ATGACCTTGA-----
 A C G T A T C G A C G T C T A G C G T A A T G C G A T C C G A T A C G T C G T A C G T A A G C T T G C A A C G T T C G A T A C G
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTGACCTTAABATAV
NATGACCTTGA-----
 A C G T A T C G A C G T C T A G C G T A A T G C G A T C C G A T A C G T C G T A C G T A A G C T T G C A A C G T T C G A T A C G
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGTGACCTTAABATAV
-TTGACCTANTTATN-
 A C G T A T C G A C G T C T A G C G T A A T G C G A T C C G A T A C G T C G T A C G T A A G C T T G C A A C G T T C G A T A C G
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGTGACCTTAABATAV---
--TGACCTTTGCATGACCT
 A C G T A T C G A C G T C T A G C G T A A T G C G A T C C G A T A C G T C G T A C G T A A G C T T G C A A C G T T C G A T A C G A C G T A C G T A C G T
A C G T A C G T G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T