Information for 9-TGTAATTTAC (Motif 15)

C A G T T C A G G A C T G T C A C G T A C G A T A C G T A C G T G T C A T G A C
Reverse Opposite:
A C T G C A G T T G C A T G C A G C T A G C A T C A G T C T G A A G T C G T C A
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.648
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.48%
Number of Background Sequences with motif942.8
Percentage of Background Sequences with motif1.96%
Average Position of motif in Targets49.4 +/- 28.3bp
Average Position of motif in Background51.2 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTAATTTAC
GGGAATTTCC
 C A G T T C A G G A C T G T C A C G T A C G A T A C G T A C G T G T C A T G A C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

UNCX/MA0721.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGTAATTTAC
-NTAATTAN-
 C A G T T C A G G A C T G T C A C G T A C G A T A C G T A C G T G T C A T G A C
A C G T A G C T C G A T C T G A C T G A C A G T G A C T C T G A T C A G A C G T

VAX1/MA0722.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTAATTTAC
-NTAATTAG-
 C A G T T C A G G A C T G T C A C G T A C G A T A C G T A C G T G T C A T G A C
A C G T C T A G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTAATTTAC----
-NTGATTTATGGCC
 C A G T T C A G G A C T G T C A C G T A C G A T A C G T A C G T G T C A T G A C A C G T A C G T A C G T A C G T
A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

MIXL1/MA0662.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTAATTTAC
NNTAATTANN
 C A G T T C A G G A C T G T C A C G T A C G A T A C G T A C G T G T C A T G A C
A C T G A G C T C G A T T C G A T C G A C G A T A G C T C T G A T C A G G C T A

MEOX2/MA0706.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTAATTTAC
AGTAATTAAC
 C A G T T C A G G A C T G T C A C G T A C G A T A C G T A C G T G T C A T G A C
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

RAX/MA0718.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTAATTTAC
NTTAATTGNN
 C A G T T C A G G A C T G T C A C G T A C G A T A C G T A C G T G T C A T G A C
C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C

PH0053.1_Hoxa6/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGTAATTTAC--
NTNAGGTAATTACCTT
 A C G T A C G T A C G T A C G T C A G T T C A G G A C T G T C A C G T A C G A T A C G T A C G T G T C A T G A C A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

VAX2/MA0723.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTAATTTAC
-NTAATTAG-
 C A G T T C A G G A C T G T C A C G T A C G A T A C G T A C G T G T C A T G A C
A C G T T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G A C G T

SHOX/MA0630.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGTAATTTAC
-TTAATTGG-
 C A G T T C A G G A C T G T C A C G T A C G A T A C G T A C G T G T C A T G A C
A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G A C G T