Information for 8-CATCCTGCDGAGGCGG (Motif 12)

A G T C C G T A C G A T A G T C A G T C A C G T A C T G A G T C C A G T A T C G G T C A A C T G A C T G G T A C C T A G A C T G
Reverse Opposite:
A G T C A G T C A C T G G T A C A G T C A C G T A T G C G T A C A C T G A G T C G T C A A C T G A C T G C G T A A C G T A C T G
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.816
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.6 +/- 23.2bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CATCCTGCDGAGGCGG
CCCCCTGCTGTG----
 A G T C C G T A C G A T A G T C A G T C A C G T A C T G A G T C C A G T A T C G G T C A A C T G A C T G G T A C C T A G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATCCTGCDGAGGCGG
GGCCYCCTGCTGDGH---
 A C G T A C G T A G T C C G T A C G A T A G T C A G T C A C G T A C T G A G T C C A G T A T C G G T C A A C T G A C T G G T A C C T A G A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CATCCTGCDGAGGCGG
ACATCCTGNT-------
 A C G T A G T C C G T A C G A T A G T C A G T C A C G T A C T G A G T C C A G T A T C G G T C A A C T G A C T G G T A C C T A G A C T G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CATCCTGCDGAGGCGG
---CCTGCTGAGH---
 A G T C C G T A C G A T A G T C A G T C A C G T A C T G A G T C C A G T A T C G G T C A A C T G A C T G G T A C C T A G A C T G
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATCCTGCDGAGGCGG
TNTCCTGCTGTGNNG-
 A G T C C G T A C G A T A G T C A G T C A C G T A C T G A G T C C A G T A T C G G T C A A C T G A C T G G T A C C T A G A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CATCCTGCDGAGGCGG
TACATCCGGGT-------
 A C G T A C G T A G T C C G T A C G A T A G T C A G T C A C G T A C T G A G T C C A G T A T C G G T C A A C T G A C T G G T A C C T A G A C T G
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CATCCTGCDGAGGCGG
TCNCCTGCTGNGNNN-
 A G T C C G T A C G A T A G T C A G T C A C G T A C T G A G T C C A G T A T C G G T C A A C T G A C T G G T A C C T A G A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CATCCTGCDGAGGCGG
NNTCCTGCTGTGNNN-
 A G T C C G T A C G A T A G T C A G T C A C G T A C T G A G T C C A G T A T C G G T C A A C T G A C T G G T A C C T A G A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CATCCTGCDGAGGCGG
NNAYTTCCTGHN-------
 A C G T A C G T A C G T A G T C C G T A C G A T A G T C A G T C A C G T A C T G A G T C C A G T A T C G G T C A A C T G A C T G G T A C C T A G A C T G
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CATCCTGCDGAGGCGG
NACTTCCGGT--------
 A C G T A C G T A G T C C G T A C G A T A G T C A G T C A C G T A C T G A G T C C A G T A T C G G T C A A C T G A C T G G T A C C T A G A C T G
G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T