Information for 3-AGMGAGGCASCCA (Motif 7)

C G T A A C T G G T A C A C T G C T G A A T C G A C T G A G T C C G T A A T C G A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G A C T G A T G C A C G T A C T G A G T C A T G C A G C T A G T C A C T G A G T C A C G T
p-value:1e-11
log p-value:-2.586e+01
Information Content per bp:1.891
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 19.4bp
Average Position of motif in Background47.6 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGMGAGGCASCCA
-GGGCGGGACC--
 C G T A A C T G G T A C A C T G C T G A A T C G A C T G A G T C C G T A A T C G A G T C A G T C C G T A
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGMGAGGCASCCA-----
--CGAAGCACACAAAATA
 C G T A A C T G G T A C A C T G C T G A A T C G A C T G A G T C C G T A A T C G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGMGAGGCASCCA-----
--AGCGGCACACACGCAA
 C G T A A C T G G T A C A C T G C T G A A T C G A C T G A G T C C G T A A T C G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AGMGAGGCASCCA-
------BCAGACWA
 C G T A A C T G G T A C A C T G C T G A A T C G A C T G A G T C C G T A A T C G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGMGAGGCASCCA
---GCCACACCCA
 C G T A A C T G G T A C A C T G C T G A A T C G A C T G A G T C C G T A A T C G A G T C A G T C C G T A
A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGMGAGGCASCCA-
TGGCAGNCTGCCAG
 C G T A A C T G G T A C A C T G C T G A A T C G A C T G A G T C C G T A A T C G A G T C A G T C C G T A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:AGMGAGGCASCCA-
--GGCCACACCCAN
 C G T A A C T G G T A C A C T G C T G A A T C G A C T G A G T C C G T A A T C G A G T C A G T C C G T A A C G T
A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

FOSL2/MA0478.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AGMGAGGCASCCA
-NTGAGTCATCN-
 C G T A A C T G G T A C A C T G C T G A A T C G A C T G A G T C C G T A A T C G A G T C A G T C C G T A
A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C A C G T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AGMGAGGCASCCA--
TAAGCCACGCCCCCTTT
 A C G T A C G T C G T A A C T G G T A C A C T G C T G A A T C G A C T G A G T C C G T A A T C G A G T C A G T C C G T A A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AGMGAGGCASCCA
--GGCCACACCCA
 C G T A A C T G G T A C A C T G C T G A A T C G A C T G A G T C C G T A A T C G A G T C A G T C C G T A
A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A