Information for 2-CAGCCAGGGCTTCCAC (Motif 3)

A T G C C G T A A C T G A G T C A G T C C T G A A C T G C T A G A C T G A T G C A G C T C A G T A G T C A G T C C G T A T A G C
Reverse Opposite:
A C T G A C G T A C T G A C T G G T C A C T G A A T C G G T A C A G T C A G T C A G C T A C T G A C T G A G T C A C G T A T C G
p-value:1e-13
log p-value:-3.000e+01
Information Content per bp:1.853
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.7 +/- 25.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:1
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CAGCCAGGGCTTCCAC
NNNGGGHAGCAHRTGCTRCC--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A G T C C T G A A C T G C T A G A C T G A T G C A G C T C A G T A G T C A G T C C G T A T A G C
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGCCAGGGCTTCCAC
-TGCCTGCGYCMCCTT
 A T G C C G T A A C T G A G T C A G T C C T G A A C T G C T A G A C T G A T G C A G C T C A G T A G T C A G T C C G T A T A G C
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGCCAGGGCTTCCAC
CAGCC-----------
 A T G C C G T A A C T G A G T C A G T C C T G A A C T G C T A G A C T G A T G C A G C T C A G T A G T C A G T C C G T A T A G C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGCCAGGGCTTCCAC
GAGSCCGAGC------
 A T G C C G T A A C T G A G T C A G T C C T G A A C T G C T A G A C T G A T G C A G C T C A G T A G T C A G T C C G T A T A G C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAGGGCTTCCAC
SCAGYCADGCATGAC--
 A C G T A T G C C G T A A C T G A G T C A G T C C T G A A C T G C T A G A C T G A T G C A G C T C A G T A G T C A G T C C G T A T A G C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGCCAGGGCTTCCAC
-AGAAATGACTTCCCT
 A T G C C G T A A C T G A G T C A G T C C T G A A C T G C T A G A C T G A T G C A G C T C A G T A G T C A G T C C G T A T A G C
A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCAGGGCTTCCAC--
NTGACTCANTTTTTCCANTN
 A C G T A C G T A T G C C G T A A C T G A G T C A G T C C T G A A C T G C T A G A C T G A T G C A G C T C A G T A G T C A G T C C G T A T A G C A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAGGGCTTCCAC
BCAGACWA---------
 A C G T A T G C C G T A A C T G A G T C A G T C C T G A A C T G C T A G A C T G A T G C A G C T C A G T A G T C A G T C C G T A T A G C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CAGCCAGGGCTTCCAC
---CNAGGCCT-----
 A T G C C G T A A C T G A G T C A G T C C T G A A C T G C T A G A C T G A T G C A G C T C A G T A G T C A G T C C G T A T A G C
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CAGCCAGGGCTTCCAC
ATGCCCGGGCATGT--
 A T G C C G T A A C T G A G T C A G T C C T G A A C T G C T A G A C T G A T G C A G C T C A G T A G T C A G T C C G T A T A G C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T