p-value: | 1e-6 |
log p-value: | -1.604e+01 |
Information Content per bp: | 1.863 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.42% |
Number of Background Sequences with motif | 2.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 59.2 +/- 22.9bp |
Average Position of motif in Background | 32.5 +/- 18.8bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0205.1_Zic1_2/Jaspar
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GMWGCRYCGCTGSAGG--- ----CCACACAGCAGGAGA |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GMWGCRYCGCTGSAGG-- ---NCGCAGCGGGGGGTC |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GMWGCRYCGCTGSAGG--- ----CCACACAGCAGGAGA |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GMWGCRYCGCTGSAGG----- ------DCHCAGCAGGRGGCC |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GMWGCRYCGCTGSAGG--- -------CACAGCAGGGGG |
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GLIS2/MA0736.1/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GMWGCRYCGCTGSAGG-- ----CTTCGCGGGGGGTC |
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ZIC4/MA0751.1/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GMWGCRYCGCTGSAGG-- ---NCNCAGCGGGGGGTC |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GMWGCRYCGCTGSAGG--- ----GAGCACAGCAGGACA |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GMWGCRYCGCTGSAGG-- ----CACAGCGGGGGGTC |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GMWGCRYCGCTGSAGG--- --AATCGCACTGCATTCCG |
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