Information for 10-CGGTCCCATCTGC (Motif 20)

A G T C C T A G A C T G A C G T A G T C A G T C A G T C C G T A C G A T A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C T G C G T A A G T C A G T C A C T G
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.950
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.4 +/- 25.6bp
Average Position of motif in Background57.1 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CGGTCCCATCTGC-
----ACCATCTGTT
 A G T C C T A G A C T G A C G T A G T C A G T C A G T C C G T A C G A T A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CGGTCCCATCTGC-
----GCCATCTGTT
 A G T C C T A G A C T G A C G T A G T C A G T C A G T C C G T A C G A T A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGGTCCCATCTGC----
CCNNACCATCTGGCCTN
 A G T C C T A G A C T G A C G T A G T C A G T C A G T C C G T A C G A T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGGTCCCATCTGC-
----CGCAGCTGCG
 A G T C C T A G A C T G A C G T A G T C A G T C A G T C C G T A C G A T A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGGTCCCATCTGC---
----NVCAGCTGBBNN
 A G T C C T A G A C T G A C G T A G T C A G T C A G T C C G T A C G A T A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGGTCCCATCTGC-
----RCCATMTGTT
 A G T C C T A G A C T G A C G T A G T C A G T C A G T C C G T A C G A T A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGGTCCCATCTGC----
--CGACCAACTGCCGTG
 A G T C C T A G A C T G A C G T A G T C A G T C A G T C C G T A C G A T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGGTCCCATCTGC
---NNACAGCTGC
 A G T C C T A G A C T G A C G T A G T C A G T C A G T C C G T A C G A T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CGGTCCCATCTGC
-----CCATATGT
 A G T C C T A G A C T G A C G T A G T C A G T C A G T C C G T A C G A T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGGTCCCATCTGC---
----GCCAGCTGBTNB
 A G T C C T A G A C T G A C G T A G T C A G T C A G T C C G T A C G A T A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C