Information for 1-CCTGTGGCTGCCC (Motif 2)

A T G C A G T C C G A T A C T G A C G T A T C G A T C G A G T C A C G T A T C G A G T C G T A C A G T C
Reverse Opposite:
C T A G A C T G C T A G A T G C C G T A C T A G A T G C A T G C C G T A A G T C C G T A A C T G A T C G
p-value:1e-13
log p-value:-3.080e+01
Information Content per bp:1.882
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.9 +/- 33.9bp
Average Position of motif in Background32.1 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGGCTGCCC
GTCTGTGGTTT---
 A C G T A T G C A G T C C G A T A C T G A C G T A T C G A T C G A G T C A C G T A T C G A G T C G T A C A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTGTGGCTGCCC
GCTGTGGTTT---
 A T G C A G T C C G A T A C T G A C G T A T C G A T C G A G T C A C G T A T C G A G T C G T A C A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTGTGGCTGCCC
-CTGTGGTTTN--
 A T G C A G T C C G A T A C T G A C G T A T C G A T C G A G T C A C G T A T C G A G T C G T A C A G T C
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTGTGGCTGCCC
NNTGTGGTTT---
 A T G C A G T C C G A T A C T G A C G T A T C G A T C G A G T C A C G T A T C G A G T C G T A C A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTGTGGCTGCCC
GCTGTG-------
 A T G C A G T C C G A T A C T G A C G T A T C G A T C G A G T C A C G T A T C G A G T C G T A C A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTGGCTGCCC
TGCCTGAGGCN----
 A C G T A C G T A T G C A G T C C G A T A C T G A C G T A T C G A T C G A G T C A C G T A T C G A G T C G T A C A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTGTGGCTGCCC
NNHTGTGGTTWN--
 A C G T A T G C A G T C C G A T A C T G A C G T A T C G A T C G A G T C A C G T A T C G A G T C G T A C A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTGGCTGCCC
ANCCACCTGTTGCNC---
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C T G A C G T A T C G A T C G A G T C A C G T A T C G A G T C G T A C A G T C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTGGCTGCCC
NGCCTGAGGCN----
 A C G T A C G T A T G C A G T C C G A T A C T G A C G T A T C G A T C G A G T C A C G T A T C G A G T C G T A C A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTGGCTGCCC
NGCCTNAGGCN----
 A C G T A C G T A T G C A G T C C G A T A C T G A C G T A T C G A T C G A G T C A C G T A T C G A G T C G T A C A G T C
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T