Information for 7-GCACGTGAAC (Motif 19)

A C T G A G T C G T C A A T G C A C T G C A G T A T C G T G C A T C G A A G T C
Reverse Opposite:
A C T G A G C T A C G T A T G C G C T A A G T C A T C G A C G T A C T G T G A C
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.843
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif108.0
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets58.4 +/- 18.9bp
Average Position of motif in Background49.1 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Id2/MA0617.1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GCACGTGAAC
GCACGTGA--
 A C T G A G T C G T C A A T G C A C T G C A G T A T C G T G C A T C G A A G T C
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GCACGTGAAC
KCACGTGMCN
 A C T G A G T C G T C A A T G C A C T G C A G T A T C G T G C A T C G A A G T C
C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

BHLHE40/MA0464.2/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GCACGTGAAC
GTCACGTGAN-
 A C G T A C T G A G T C G T C A A T G C A C T G C A G T A T C G T G C A T C G A A G T C
C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GCACGTGAAC
NCACGTGACN
 A C T G A G T C G T C A A T G C A C T G C A G T A T C G T G C A T C G A A G T C
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

Mlxip/MA0622.1/Jaspar

Match Rank:5
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GCACGTGAAC
GCACGTGT--
 A C T G A G T C G T C A A T G C A C T G C A G T A T C G T G C A T C G A A G T C
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:6
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GCACGTGAAC
-CACGTG---
 A C T G A G T C G T C A A T G C A C T G C A G T A T C G T G C A T C G A A G T C
A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GCACGTGAAC
NVCACGTG---
 A C G T A C T G A G T C G T C A A T G C A C T G C A G T A T C G T G C A T C G A A G T C
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GCACGTGAAC
GNCACGTG---
 A C G T A C T G A G T C G T C A A T G C A C T G C A G T A T C G T G C A T C G A A G T C
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:9
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GCACGTGAAC
ACCACGTGCC-
 A C G T A C T G A G T C G T C A A T G C A C T G C A G T A T C G T G C A T C G A A G T C
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GCACGTGAAC
TCACGTGACC
 A C T G A G T C G T C A A T G C A C T G C A G T A T C G T G C A T C G A A G T C
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C