Information for 8-TTGTGGCTGCTGG (Motif 17)

A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A C T G A T G C A C G T A C T G A T C G
Reverse Opposite:
A T G C A G T C C G T A A T C G G T A C C G T A A C T G A G T C A G T C C G T A A G T C G T C A C G T A
p-value:1e-9
log p-value:-2.086e+01
Information Content per bp:1.903
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 17.2bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTGTGGCTGCTGG
GTCTGTGGTTT----
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A C T G A T G C A C G T A C T G A T C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGGCTGCTGG
NNTGTGGTTT----
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A C T G A T G C A C G T A C T G A T C G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGGCTGCTGG
NNHTGTGGTTWN---
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A C T G A T G C A C G T A C T G A T C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGTGGCTGCTGG-
-NGNGACAGCTGCN
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A C T G A T G C A C G T A C T G A T C G A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTGTGGCTGCTGG
---TGGCAGTTGG
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A C T G A T G C A C G T A C T G A T C G
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TTGTGGCTGCTGG
----ANCAGCTG-
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A C T G A T G C A C G T A C T G A T C G
A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TTGTGGCTGCTGG--
----GACAGCTGCAG
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A C T G A T G C A C G T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTGTGGCTGCTGG-
--NNVVCAGCTGBN
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A C T G A T G C A C G T A C T G A T C G A C G T
A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTGTGGCTGCTGG-
--VNAVCAGCTGGC
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A C T G A T G C A C G T A C T G A T C G A C G T
A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGTGGCTGCTGG
CTGTGGTTTN---
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A C T G A T G C A C G T A C T G A T C G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T