Information for 6-CGCGTGCATA (Motif 15)

A T G C A C T G A G T C A T C G C G A T A C T G A G T C C G T A A C G T C T G A
Reverse Opposite:
A G C T G T C A A C G T A C T G A G T C G C T A A T G C A C T G A G T C A T C G
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.868
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif26.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets59.1 +/- 21.7bp
Average Position of motif in Background45.1 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CGCGTGCATA--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A T G C A C T G A G T C A T C G C G A T A C T G A G T C C G T A A C G T C T G A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Hes1/MA1099.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CGCGTGCATA
NNCGCGTGNN--
 A C G T A C G T A T G C A C T G A G T C A T C G C G A T A C T G A G T C C G T A A C G T C T G A
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGCGTGCATA
TGCGTG----
 A T G C A C T G A G T C A T C G C G A T A C T G A G T C C G T A A C G T C T G A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CGCGTGCATA
GGCACGTGCC--
 A C G T A C G T A T G C A C T G A G T C A T C G C G A T A C T G A G T C C G T A A C G T C T G A
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CGCGTGCATA
GTGCCGTGTGCAAA
 A C G T A C G T A C G T A C G T A T G C A C T G A G T C A T C G C G A T A C T G A G T C C G T A A C G T C T G A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTGCATA
TTGCGTGCVA-
 A C G T A T G C A C T G A G T C A T C G C G A T A C T G A G T C C G T A A C G T C T G A
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGCGTGCATA---
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T A T G C A C T G A G T C A T C G C G A T A C T G A G T C C G T A A C G T C T G A A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGCGTGCATA
NGTGGGCAT-
 A T G C A C T G A G T C A T C G C G A T A C T G A G T C C G T A A C G T C T G A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGCGTGCATA
GGACGTGC---
 A C G T A T G C A C T G A G T C A T C G C G A T A C T G A G T C C G T A A C G T C T G A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTGCATA
TCACGTGC---
 A C G T A T G C A C T G A G T C A T C G C G A T A C T G A G T C C G T A A C G T C T G A
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T