Information for 1-CYCCTGGMGCTGCAGG (Motif 1)

A G T C A G T C A G T C A G T C A C G T A C T G C T A G T G A C A C T G A T G C C G A T A C T G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G T C C G T A A T C G A G T C A C T G A G T C A G T C G T C A C T A G A C T G T C A G A C T G
p-value:1e-13
log p-value:-3.191e+01
Information Content per bp:1.862
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.7 +/- 19.1bp
Average Position of motif in Background62.0 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CYCCTGGMGCTGCAGG--
---AAGGKGRCGCAGGCA
 A G T C A G T C A G T C A G T C A C G T A C T G C T A G T G A C A C T G A T G C C G A T A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CYCCTGGMGCTGCAGG-----
------DCHCAGCAGGRGGCC
 A G T C A G T C A G T C A G T C A C G T A C T G C T A G T G A C A C T G A T G C C G A T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CYCCTGGMGCTGCAGG---
----CCACACAGCAGGAGA
 A G T C A G T C A G T C A G T C A C G T A C T G C T A G T G A C A C T G A T G C C G A T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CYCCTGGMGCTGCAGG---
----GAGCACAGCAGGACA
 A G T C A G T C A G T C A G T C A C G T A C T G C T A G T G A C A C T G A T G C C G A T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CYCCTGGMGCTGCAGG---
-------CACAGCAGGGGG
 A G T C A G T C A G T C A G T C A C G T A C T G C T A G T G A C A C T G A T G C C G A T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CYCCTGGMGCTGCAGG
------DCTCAGCAGG
 A G T C A G T C A G T C A G T C A C G T A C T G C T A G T G A C A C T G A T G C C G A T A C T G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CYCCTGGMGCTGCAGG---
----CCACACAGCAGGAGA
 A G T C A G T C A G T C A G T C A C G T A C T G C T A G T G A C A C T G A T G C C G A T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:CYCCTGGMGCTGCAGG-----
---------SDGCAGGTGCNS
 A G T C A G T C A G T C A G T C A C G T A C T G C T A G T G A C A C T G A T G C C G A T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CYCCTGGMGCTGCAGG
TCCCCTGGGGAC-----
 A C G T A G T C A G T C A G T C A G T C A C G T A C T G C T A G T G A C A C T G A T G C C G A T A C T G A G T C C G T A A C T G A C T G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CYCCTGGMGCTGCAGG
TGCCTGAGGCN-----
 A G T C A G T C A G T C A G T C A C G T A C T G C T A G T G A C A C T G A T G C C G A T A C T G A G T C C G T A A C T G A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T