Information for 6-GCCARGGACTCACTTT (Motif 9)

A T C G A T G C G T A C G C T A C T A G A T C G T C A G C G T A G T A C C G A T A G T C G C T A A G T C A C G T A G C T A C G T
Reverse Opposite:
G T C A C T G A C G T A C T A G C G A T A C T G C G T A A C T G A C G T A G T C T A G C A G T C C A G T C A T G A T C G T A G C
p-value:1e-11
log p-value:-2.704e+01
Information Content per bp:1.709
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.8 +/- 28.4bp
Average Position of motif in Background46.9 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN(var.2)/MA0489.1/Jaspar

Match Rank:1
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCCARGGACTCACTTT--
----ATGAGTCATNTNNT
 A T C G A T G C G T A C G C T A C T A G A T C G T C A G C G T A G T A C C G A T A G T C G C T A A G T C A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

JDP2/MA0655.1/Jaspar

Match Rank:2
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GCCARGGACTCACTTT
----ATGACTCAT---
 A T C G A T G C G T A C G C T A C T A G A T C G T C A G C G T A G T A C C G A T A G T C G C T A A G T C A C G T A G C T A C G T
A C G T A C G T A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCCARGGACTCACTTT----
---GCAACCTCATTATNNNN
 A T C G A T G C G T A C G C T A C T A G A T C G T C A G C G T A G T A C C G A T A G T C G C T A A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GCCARGGACTCACTTT
-----TGAGTCATTTC
 A T C G A T G C G T A C G C T A C T A G A T C G T C A G C G T A G T A C C G A T A G T C G C T A A G T C A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

IRF2/MA0051.1/Jaspar

Match Rank:5
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCCARGGACTCACTTT--
GTTTTGCTTTCACTTTCC
 A T C G A T G C G T A C G C T A C T A G A T C G T C A G C G T A G T A C C G A T A G T C G C T A A G T C A C G T A G C T A C G T A C G T A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GCCARGGACTCACTTT
---DATGASTCATHN-
 A T C G A T G C G T A C G C T A C T A G A T C G T C A G C G T A G T A C C G A T A G T C G C T A A G T C A C G T A G C T A C G T
A C G T A C G T A C G T C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCCARGGACTCACTTT
----AGGVNCCTTTGT
 A T C G A T G C G T A C G C T A C T A G A T C G T C A G C G T A G T A C C G A T A G T C G C T A A G T C A C G T A G C T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.49
Offset:5
Orientation:forward strand
Alignment:GCCARGGACTCACTTT-
-----AGTTTCAGTTTC
 A T C G A T G C G T A C G C T A C T A G A T C G T C A G C G T A G T A C C G A T A G T C G C T A A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GCCARGGACTCACTTT
---TGTGACTCATT--
 A T C G A T G C G T A C G C T A C T A G A T C G T C A G C G T A G T A C C G A T A G T C G C T A A G T C A C G T A G C T A C G T
A C G T A C G T A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GCCARGGACTCACTTT-
-----ACTTTCACTTTC
 A T C G A T G C G T A C G C T A C T A G A T C G T C A G C G T A G T A C C G A T A G T C G C T A A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C