Information for 18-CCACTCAGTACTC (Motif 30)

G A T C A G T C G C T A A G T C C A G T A T G C C G T A A T C G A G C T G T C A A G T C G A C T A G T C
Reverse Opposite:
T C A G C T G A C T A G C A G T C T G A T A G C G A C T A T C G G C T A C T A G C A G T C T A G C T A G
p-value:1e-6
log p-value:-1.549e+01
Information Content per bp:1.687
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif167.2
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets50.1 +/- 27.6bp
Average Position of motif in Background52.5 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCACTCAGTACTC-
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T G A T C A G T C G C T A A G T C C A G T A T G C C G T A A T C G A G C T G T C A A G T C G A C T A G T C A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCACTCAGTACTC
MRSCACTYAA-----
 A C G T A C G T G A T C A G T C G C T A A G T C C A G T A T G C C G T A A T C G A G C T G T C A A G T C G A C T A G T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCACTCAGTACTC
AGCCACTCAAG----
 A C G T A C G T G A T C A G T C G C T A A G T C C A G T A T G C C G T A A T C G A G C T G T C A A G T C G A C T A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CCACTCAGTACTC
AAATGGACCAATCAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G T C G C T A A G T C C A G T A T G C C G T A A T C G A G C T G T C A A G T C G A C T A G T C
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCACTCAGTACTC-----
-CGAACAGTGCTCACTAT
 G A T C A G T C G C T A A G T C C A G T A T G C C G T A A T C G A G C T G T C A A G T C G A C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCACTCAGTACTC
ACCACTTAA-----
 A C G T G A T C A G T C G C T A A G T C C A G T A T G C C G T A A T C G A G C T G T C A A G T C G A C T A G T C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCACTCAGTACTC
AASCACTCAA-----
 A C G T A C G T G A T C A G T C G C T A A G T C C A G T A T G C C G T A A T C G A G C T G T C A A G T C G A C T A G T C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CCACTCAGTACTC
NNAGTCCCACTCNNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G T C G C T A A G T C C A G T A T G C C G T A A T C G A G C T G T C A A G T C G A C T A G T C
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCACTCAGTACTC
ACTAGCCAATCA------
 A C G T A C G T A C G T A C G T A C G T G A T C A G T C G C T A A G T C C A G T A T G C C G T A A T C G A G C T G T C A A G T C G A C T A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCACTCAGTACTC
ACCACTTAA-----
 A C G T G A T C A G T C G C T A A G T C C A G T A T G C C G T A A T C G A G C T G T C A A G T C G A C T A G T C
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T