Information for 5-AAACCACATC (Motif 3)

G T C A T C G A T C G A G A T C T G A C C G T A A G T C C G T A C G A T G T A C
Reverse Opposite:
C A T G G C T A G C A T T C A G G C A T A C T G C T A G A G C T A G C T C A G T
p-value:1e-24
log p-value:-5.564e+01
Information Content per bp:1.654
Number of Target Sequences with motif91.0
Percentage of Target Sequences with motif11.55%
Number of Background Sequences with motif1571.0
Percentage of Background Sequences with motif3.25%
Average Position of motif in Targets47.7 +/- 24.8bp
Average Position of motif in Background49.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:AAACCACATC
AAACCACANN
 G T C A T C G A T C G A G A T C T G A C C G T A A G T C C G T A C G A T G T A C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:AAACCACATC
AAACCACAGC
 G T C A T C G A T C G A G A T C T G A C C G T A A G T C C G T A C G A T G T A C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-AAACCACATC
NAAACCACAG-
 A C G T G T C A T C G A T C G A G A T C T G A C C G T A A G T C C G T A C G A T G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-AAACCACATC-
NWAACCACADNN
 A C G T G T C A T C G A T C G A G A T C T G A C C G T A A G T C C G T A C G A T G T A C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:AAACCACATC-
AAACCACAGAN
 G T C A T C G A T C G A G A T C T G A C C G T A A G T C C G T A C G A T G T A C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AAACCACATC
AAACCGCAAA
 G T C A T C G A T C G A G A T C T G A C C G T A A G T C C G T A C G A T G T A C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAACCACATC
AAACCGCAA-
 G T C A T C G A T C G A G A T C T G A C C G T A A G T C C G T A C G A T G T A C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AAACCACATC----
--ACCACATCCTGT
 G T C A T C G A T C G A G A T C T G A C C G T A A G T C C G T A C G A T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AAACCACATC
TCCAATCCACA--
 A C G T A C G T A C G T G T C A T C G A T C G A G A T C T G A C C G T A A G T C C G T A C G A T G T A C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AAACCACATC
SSAATCCACANN
 A C G T A C G T G T C A T C G A T C G A G A T C T G A C C G T A A G T C C G T A C G A T G T A C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C