p-value: | 1e-8 |
log p-value: | -1.966e+01 |
Information Content per bp: | 1.749 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.51% |
Number of Background Sequences with motif | 0.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 61.0 +/- 20.6bp |
Average Position of motif in Background | 72.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
MF0011.1_HMG_class/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | TCAAGAGCAACAAKAT --------AACAAT-- |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TCAAGAGCAACAAKAT--- --NNNNNGAACAATTGANN |
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PB0093.1_Zfp105_1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCAAGAGCAACAAKAT -AACAAACAACAAGAG |
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Sox5/MA0087.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TCAAGAGCAACAAKAT -------NAACAAT-- |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TCAAGAGCAACAAKAT--- --TCACGGAACAATAGGTG |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCAAGAGCAACAAKAT------- -AATAAAGAACAATAGAATTTCA |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCAAGAGCAACAAKAT--- ---TTAAGAACAATAAATT |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCAAGAGCAACAAKAT---- ---TAGTGAACAATAGATTT |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCAAGAGCAACAAKAT--- ---TTTAGAACAATAAAAT |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TCAAGAGCAACAAKAT---- ----AATGAACAATGGAATT |
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