Information for 6-GGGCACCCGCCYC (Motif 12)

A T C G A C T G A C T G A T G C T G C A G A T C A T G C A G T C A C T G A T G C A G T C G A C T A T G C
Reverse Opposite:
T A C G C T G A A C T G A T C G A G T C C T A G T A C G C A T G A C G T A T C G G T A C G T A C A T G C
p-value:1e-9
log p-value:-2.287e+01
Information Content per bp:1.755
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif146.6
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets63.2 +/- 24.3bp
Average Position of motif in Background49.6 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GGGCACCCGCCYC
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G A T G C T G C A G A T C A T G C A G T C A C T G A T G C A G T C G A C T A T G C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGGCACCCGCCYC-----
---GCCCCGCCCCCTCCC
 A T C G A C T G A C T G A T G C T G C A G A T C A T G C A G T C A C T G A T G C A G T C G A C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGCACCCGCCYC-
--GGCCCCGCCCCC
 A T C G A C T G A C T G A T G C T G C A G A T C A T G C A G T C A C T G A T G C A G T C G A C T A T G C A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGCACCCGCCYC
TTTGCACACGGCAC
 A C G T A T C G A C T G A C T G A T G C T G C A G A T C A T G C A G T C A C T G A T G C A G T C G A C T A T G C
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGCACCCGCCYC
SNGCACCTGCHS-
 A T C G A C T G A C T G A T G C T G C A G A T C A T G C A G T C A C T G A T G C A G T C G A C T A T G C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

HES7/MA0822.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGCACCCGCCYC
TGGCACGTGCCA-
 A T C G A C T G A C T G A T G C T G C A G A T C A T G C A G T C A C T G A T G C A G T C G A C T A T G C
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGCACCCGCCYC
-GGCACGCGTC--
 A T C G A C T G A C T G A T G C T G C A G A T C A T G C A G T C A C T G A T G C A G T C G A C T A T G C
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGCACCCGCCYC
TGGCACGTGCCG-
 A T C G A C T G A C T G A T G C T G C A G A T C A T G C A G T C A C T G A T G C A G T C G A C T A T G C
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G A C G T

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGCACCCGCCYC
TGCGCAGGCGC---
 A C G T A T C G A C T G A C T G A T G C T G C A G A T C A T G C A G T C A C T G A T G C A G T C G A C T A T G C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGGCACCCGCCYC
--GGTCCCGCCC-
 A T C G A C T G A C T G A T G C T G C A G A T C A T G C A G T C A C T G A T G C A G T C G A C T A T G C
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T