Information for 16-ATGCAGAGGAGGC (Motif 17)

C G T A C G A T A C T G A G T C C G T A T A C G C G T A A C T G A T C G C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A T G C A G T C A C G T A G T C A C G T A C T G G T A C C G T A A C G T
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 13.0bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATGCAGAGGAGGC-----
-NTNNNAGGAGTCTCNTN
 C G T A C G A T A C T G A G T C C G T A T A C G C G T A A C T G A T C G C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGCAGAGGAGGC
WATGCAAATGAG--
 A C G T C G T A C G A T A C T G A G T C C G T A T A C G C G T A A C T G A T C G C G T A A C T G A C T G A G T C
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATGCAGAGGAGGC--
GAGCACAGCAGGACA
 C G T A C G A T A C T G A G T C C G T A T A C G C G T A A C T G A T C G C G T A A C T G A C T G A G T C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ATGCAGAGGAGGC
---AACAGGAAGT
 C G T A C G A T A C T G A G T C C G T A T A C G C G T A A C T G A T C G C G T A A C T G A C T G A G T C
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ATGCAGAGGAGGC
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T C G T A C G A T A C T G A G T C C G T A T A C G C G T A A C T G A T C G C G T A A C T G A C T G A G T C
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATGCAGAGGAGGC
TATGCWAATBAV--
 A C G T C G T A C G A T A C T G A G T C C G T A T A C G C G T A A C T G A T C G C G T A A C T G A C T G A G T C
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATGCAGAGGAGGC--
CCACACAGCAGGAGA
 C G T A C G A T A C T G A G T C C G T A T A C G C G T A A C T G A T C G C G T A A C T G A C T G A G T C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ATGCAGAGGAGGC--
---CACAGCAGGGGG
 C G T A C G A T A C T G A G T C C G T A T A C G C G T A A C T G A T C G C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAGAGGAGGC
ATATGCAAATNNN--
 A C G T A C G T C G T A C G A T A C T G A G T C C G T A T A C G C G T A A C T G A T C G C G T A A C T G A C T G A G T C
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ATGCAGAGGAGGC-
----AGAGGAAGTG
 C G T A C G A T A C T G A G T C C G T A T A C G C G T A A C T G A T C G C G T A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G