Information for 2-CCTGGAACCCVGAGVC (Motif 6)

A G T C A G T C C G A T A T C G C T A G C G T A C G T A A G T C G T A C A T G C T G C A A C T G C G T A A C T G T A G C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A G T C A C G T A T C G A C T G T C A G C G A T A C G T A G T C A T G C C G T A A C T G A C T G
p-value:1e-12
log p-value:-2.795e+01
Information Content per bp:1.791
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.8 +/- 27.4bp
Average Position of motif in Background44.1 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCTGGAACCCVGAGVC
NGNTCTAGAACCNGV----
 A C G T A C G T A C G T A G T C A G T C C G A T A T C G C T A G C G T A C G T A A G T C G T A C A T G C T G C A A C T G C G T A A C T G T A G C A G T C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCTGGAACCCVGAGVC
CCAGGAACAG------
 A G T C A G T C C G A T A T C G C T A G C G T A C G T A A G T C G T A C A T G C T G C A A C T G C G T A A C T G T A G C A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CCTGGAACCCVGAGVC
----GRTGMTRGAGCC
 A G T C A G T C C G A T A T C G C T A G C G T A C G T A A G T C G T A C A T G C T G C A A C T G C G T A A C T G T A G C A G T C
A C G T A C G T A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:CCTGGAACCCVGAGVC
---------CGGAGC-
 A G T C A G T C C G A T A T C G C T A G C G T A C G T A A G T C G T A C A T G C T G C A A C T G C G T A A C T G T A G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGAACCCVGAGVC
TTTCCTGGAAAGNNN----
 A C G T A C G T A C G T A G T C A G T C C G A T A T C G C T A G C G T A C G T A A G T C G T A C A T G C T G C A A C T G C G T A A C T G T A G C A G T C
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CCTGGAACCCVGAGVC
CTTCCNGGAA---------
 A C G T A C G T A C G T A G T C A G T C C G A T A T C G C T A G C G T A C G T A A G T C G T A C A T G C T G C A A C T G C G T A A C T G T A G C A G T C
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CCTGGAACCCVGAGVC--
---NNNACCGAGAGTNNN
 A G T C A G T C C G A T A T C G C T A G C G T A C G T A A G T C G T A C A T G C T G C A A C T G C G T A A C T G T A G C A G T C A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CCTGGAACCCVGAGVC--
---GNNACCGAGAATNNN
 A G T C A G T C C G A T A T C G C T A G C G T A C G T A A G T C G T A C A T G C T G C A A C T G C G T A A C T G T A G C A G T C A C G T A C G T
A C G T A C G T A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGAACCCVGAGVC
TTTCCTGGAAA--------
 A C G T A C G T A C G T A G T C A G T C C G A T A T C G C T A G C G T A C G T A A G T C G T A C A T G C T G C A A C T G C G T A A C T G T A G C A G T C
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:10
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----CCTGGAACCCVGAGVC
NCTTCCNGGAAGNN------
 A C G T A C G T A C G T A C G T A G T C A G T C C G A T A T C G C T A G C G T A C G T A A G T C G T A C A T G C T G C A A C T G C G T A A C T G T A G C A G T C
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T